Return to main results Retrieve Phyre Job Id

Job DescriptionP11880
Confidence68.79%DateThu Jan 5 11:33:00 GMT 2012
Rank196Aligned Residues41
% Identity15%Templatec1xx6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100........ .110.........120.........130....
Predicted Secondary structure 






..








Query SS confidence 














. .

























Query Sequence  VRQQVPARVVALTGS. . SGKTSVKEMTAAILSQCGNTLYTAGN
Query Conservation          

 



.. 




   
  

   
      
 
Alig confidence 














..

























Template Conservation        
 
 

 


 




 
             
   
 
Template Sequence  YRPKDHGWVEVIVGPXYSGKSEELIRRIRRAKIAKQKIQVFKP
Template Known Secondary structure 


TT


STTSSTT


Template Predicted Secondary structure 

















Template SS confidence 










































   2.......10.........20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions