Job Description P11880 Confidence 35.49% Date Thu Jan 5 11:33:00 GMT 2012 Rank 284 Aligned Residues 145 % Identity 21% Template c1xrsB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	V	L	L	P	L	P	G	R	H	N	I	A	N	A	L	A	A	A	A	L	S	M	S	V	G	A	T	L	D	A	I	K	A	G	L	A	N	L	K	A	V	P	G	R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	M	T	A	A	V	Q	V	L	A	E
Query Conservation
Alig confidence																		.	.																			.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																		.	.																			.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		Q	L	S	F	T	L	P	L	K	N	N	E	R	S	A	E	.	.	A	A	K	Q	I	A	L	K	M	G	L	E	E	P	S	V	V	M	.	.	.	.	.	.	.	.	.	.	.	Q	Q	S	L	D	E	E	F	T	F	F	V	V	.	.	.	Y	G	N	E	I	L	S	M	E	E	T	D	E	Y	I	K	E
Template Known Secondary structure								S	S		S	S						.	.								T	T	S	S								.	.	.	.	.	.	.	.	.	.	.						T	T							.	.	.
Template Predicted Secondary structure																		.	.																			.	.	.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		M	P	G	Y	R	V	L	V	V	G	D	M	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	.	.	.	.	.	.	.	.	.	I	D	R	V	L	S	V	G	K	Q	S	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																.																				.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	G	R	K	I	V	V	V	G	A	S	T	G	.	T	D	A	H	T	V	G	I	D	A	I	M	N	M	K	G	Y	A	G	H	Y	G	L	E	R	Y	E	M	I	D	A	Y	N	L	G	S	Q	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	D	F	I	K	K	A	V	E	L
Template Known Secondary structure			T		S									B	T	.	T												S	T	T		B	T	T	B			G	G	G		T	T								S	S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																.	170	.	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.							.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	.	.	.	.	.	.	M	E	E	V	V	R	A	L	Q	E	N	G
Query Conservation																				.	.	.	.	.	.
Alig confidence				.	.		.	.												.	.	.	.	.	.
Template Conservation				.	.		.	.
Template Sequence		E	A	.	.	D	.	.	V	L	L	V	S	Q	T	V	T	Q	K	N	V	H	I	Q	N	M	T	H	L	I	E	L	L	E	A	E	G
Template Known Secondary structure		T		.	.	S	.	.										T	T	S																T	T
Template Predicted Secondary structure				.	.		.	.
Template SS confidence
		180	.			.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions