Job Description P33018 Confidence 99.41% Date Thu Jan 5 11:50:53 GMT 2012 Rank 178 Aligned Residues 209 % Identity 17% Template c3qmwD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:thioesterase; PDBTitle: redj with peg molecule bound in the active site Resolution 2.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	P	R	D	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E	K	V	A	N	D	D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	P	P	W	A	T	H
Query Conservation
Alig confidence																.											.	.	.										.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.											.	.	.										.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	D	P	A	A	A	P	L	R	L	V	C	F	.	P	Y	A	G	G	T	V	S	A	F	.	.	.	R	G	W	Q	E	R	L	G	D	.	E	V	A	V	V	P	V	Q	L	P	G	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	R	E	R	P
Template Known Secondary structure					T	T	S		S							.			T	T			G	G	G	G	.	.	.	T	T							S	.	S									T	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T	S
Template Predicted Secondary structure																.											.	.	.										.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70																							.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	M	Y	D	Y	L	R	D	E	L	P	A	L	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	Y	T	S	V	S	A	F	A	P	I	V	N	P	C	S	V	P	W	G	I	K	A	F	S	S	Y	L	G	E	D	K	N	A
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		Y	D	T	M	E	P	L	A	E	A	V	A	D	A	L	E	E	H	R	.	L	T	H	D	Y	A	L	F	G	H	S	M	G	A	L	L	A	Y	E	V	A	C	V	L	R	R	R	G	A	P	R	P	R	H	L	F	V	S	G	S	R	A	P	H	L	Y	G	D	R	A	D	H	T	L	S	D	T	A	L	R
Template Known Secondary structure				S														T	T	T	.		S	S	S							T																T	T					S						S				G	G	G		S	S				T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																											.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	E	W	D	S	C	A	L	M	Y	A	S	N	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	P	T	L	I	D	Q	G	D	N	D	Q	F	L	A	D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	P	M	T	L
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		E	V	I	R	D	L	G	G	L	D	D	T	L	G	A	A	Y	F	D	R	R	L	P	V	L	R	A	D	L	R	A	C	E	R	Y	D	W	H	P	R	P	P	L	D	C	P	T	T	A	F	S	A	A	A	D	P	I	A	T	P	E	.	.	.	.	M	V	E	A	W	R	P	Y	T	T	G	S	F	L	R
Template Known Secondary structure							T	T	S													T													S									B	S	S								T	T		S	T	T				.	.	.	.				T	T	G	G	G	B	S	S
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Q	P	G	Y	D	H	S	Y	Y	F	I	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		R	H	L	P	G	.	N	H	F	F	L	N	G	G	P	S	R	D	R	L	L	A	H	L	G	T	E	L
Template Known Secondary structure					S	S	.		T	T	G	G	G	S	S
Template Predicted Secondary structure							.
Template SS confidence
		235	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions