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Job DescriptionP33018
Confidence99.95%DateThu Jan 5 11:50:53 GMT 2012
Rank40Aligned Residues225
% Identity16%Templatec3k2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acyl-coenzyme a thioesterase 4; PDBTitle: human acyl-coenzyme a thioesterase 4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  STLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAG
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Template Sequence  SVRAGRVRATLFLPPG. . PGPFPGIIDIFGIGGGLLEYRA. . . . . SLLAGHGFATLALAYYNFE. . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
SS..S

B


TT
S


.....TTT

SSST................
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   138.140.........150... ......160.........170..... ....180.........190....
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  FYLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGI
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Template Sequence  . . . . . . DLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN. VSATVSINGSGISGNTAINY
Template Known Secondary structure  ......TS
SS
S
TTSTTB

SST
SS.S

SB

SS
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   195....200.........210.........220.........230.........240....... ..250.........260.......
 
   182.......190.........200. ........210.........220.........230.........240....
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Query Sequence  KAFSSYLGEDKNAWLEWDSC. . . . . . . . . . . . . . . . . ALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAW
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Template Sequence  KHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGK
Template Known Secondary structure  TT



B
GGG

TTS

TT
B


TTGGGSTTB

GGG

S
TT
SSS
TT
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   268.270.........280.........290.........300.........310.........320.........330.........340.......
 
   245 ....250........ .260.........270......
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Query Sequence  P. MTLRIQPGYDHSY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YFIASFIEDHLRFHAQYL
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Template Sequence  EKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL
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TT

S


STT




TTTT




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   348.350.........360.........370.........380.........390.........400.........410
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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