Job Description P33018 Confidence 100.00% Date Thu Jan 5 11:50:53 GMT 2012 Rank 26 Aligned Residues 243 % Identity 14% Template c3iumA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state Resolution 2.25 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		W	Q	Q	R	W	R	H	D	S	S	T	L	N	C	P	M	T	F	S	I	F	L	P	P	P	R	.	D	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E	K	V	A	N	D
Query Conservation																												.
Alig confidence													.															.																																		.
Template Conservation													.																																																	.
Template Sequence		V	S	E	Q	R	F	Y	Q	S	K	D	.	G	T	R	V	P	L	I	I	S	Y	R	K	G	L	K	L	D	G	S	N	P	T	I	L	Y	G	Y	G	G	F	D	V	S	L	T	P	S	F	S	V	S	V	A	N	W	L	D	L	.	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	Q	A	W
Template Known Secondary structure											T	T	.	S											T	T				S	S											B	T	T	B																T	.	T									T	T	S	S	S	S
Template Predicted Secondary structure													.																																																	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	P	P	W	A	T	H	Y	R	M	Y	D	Y	L	R	D	E	L	P	A	L	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	Y	T	S	V	S	A	F	A	P	I
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	T	Q	Q	N	K	Q	N	V	F	D	D	F	I	A	A	A	E	Y	L	K	A	E	G	Y	T	R	T	D	R	L	A	I	R	G	G	S	N	G	G	L	L	V	G	A	V	X	T	Q	R	P	D	L	X	R	V	A	L	P	A	V	G	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	G	G	G																		T	T	S			G	G	G							T														T	T	T		S						S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		499	500															.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		172	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																																			.																																	.
Query SS confidence									.	.	.	.	.																																			.																																	.
Query Sequence		V	N	P	C	S	V	P	.	.	.	.	.	W	G	I	K	A	F	S	S	Y	L	G	E	D	K	N	A	W	L	E	W	D	S	C	A	L	M	Y	A	S	N	A	Q	D	A	.	I	P	T	L	I	D	Q	G	D	N	D	Q	F	L	A	D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	.
Query Conservation									.	.	.	.	.																																			.																																	.
Alig confidence									.	.	.	.	.																																			.																		.															.
Template Conservation																																																																		.
Template Sequence		L	D	X	L	R	Y	H	T	F	T	A	G	T	G	W	A	Y	D	Y	G	T	S	A	D	S	E	A	X	F	D	Y	L	K	G	Y	S	P	L	H	N	V	R	P	G	V	S	Y	P	S	T	X	V	T	T	A	D	H	D	D	R	V	V	P	A	.	H	S	F	K	F	A	A	T	L	Q	A	D	N	A	G
Template Known Secondary structure				G	G	G	S	T	T	S	G	G	G	G	G								S	S	S													T	T	T	T			T	T												S	S		S	S	S		T		.											T	T			S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
				245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	M	T	L	R	I	Q	P	G	Y	D	H	S	Y	Y	F	I	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L
Query Conservation		.	.
Alig confidence		.	.																			.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		P	H	P	Q	L	I	R	I	E	T	P	V	A	K	L	I	E	Q	S	A	.	.	.	.	D	I	Y	A	F	T	L	Y	E	X
Template Known Secondary structure		S	S																			.	.	.	.										T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.					.	.	.	.	.	.	670	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions