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Job DescriptionP33018
Confidence100.00%DateThu Jan 5 11:50:53 GMT 2012
Rank30Aligned Residues236
% Identity18%Templatec3gffA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:iroe-like serine hydrolase; PDBTitle: crystal structure of iroe-like serine hydrolase (np_718593.1) from2 shewanella oneidensis at 2.12 a resolution
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30........ .40.........50.........60.........70.........80.........90
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Query Sequence  WQQRWRHDSSTLNCPMTFSIFLPPPR. . DHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAN
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Template Sequence  EYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDG. . . . . EDQFDHXASLLQFLSQGTXPQIPKVIIVGIHNTN
Template Known Secondary structure 
TTTT

TTGGGS


SS.....T
SSS
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SS
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   10.........20.........30.........40.........50 .........60.........70.........80....
 
   91........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  . . . . . DDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSV
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Template Sequence  RXRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGINVLVGHSFGGLVAXEALRTDRPLFSAY
Template Known Secondary structure  S
SS

SB
TTSSB

GGGGG


TS
TTT
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S
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   166...170.........180.........190.........200.........210.........220.... .....230......
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Query Sequence  SAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQ. . . . . . . . . FLADQLQPAVLA
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Template Sequence  LALDTSLWF. . . . . . . . . . . . . . . . . . DSPHYLTLLEERVVKGDFKQKQLFXAIANNPLSPGFGVSSYHKDLNLAFADKL
Template Known Secondary structure  S

TTT..................TTT


SS


STTT

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   165....170... ......180.........190.........200.........210.........220......
 
   237..240.........250.........260.........270..
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Query Sequence  EAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFH
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Template Sequence  TKLAPKGLGFXAKYYPEETHQ. SVSHIGLYDGIRHL
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TT
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TT.T
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   227..230.........240....... ..250.........260.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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