Job Description P33018 Confidence 99.43% Date Thu Jan 5 11:50:53 GMT 2012 Rank 175 Aligned Residues 203 % Identity 16% Template c3flaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:rifr; PDBTitle: rifr - type ii thioesterase from rifamycin nrps/pks biosynthetic2 pathway - form 1 Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E	K	V	A	N	D	D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	P	P	W	A	T	H	Y	R	M	Y
Query Conservation
Alig confidence																											.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	D	A	R	A	R	L	V	C	L	P	H	A	G	G	S	A	S	F	F	F	P	L	A	.	.	.	K	A	L	A	P	.	A	V	E	V	L	A	V	Q	Y	P	G	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	R	H	E	P	P	V	D	S	I
Template Known Secondary structure			T	T		S									T	T			G	G	G	G					.	.	.				T	T	.	T									T	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T	S					S
Template Predicted Secondary structure																											.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.																							.	60	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	R	D	E	L	P	A	L	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	Y	T	S	V	S	A	F	A	P	I	V	N	P	C	S	V	P	W	G	I	K	A	F	S	S	Y	L	G	E	D	K	N	A	W	L	E	W
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		G	G	L	T	N	R	L	L	E	V	L	R	P	F	.	.	G	D	R	P	L	A	L	F	G	H	S	X	G	A	I	I	G	Y	E	L	A	L	R	X	P	E	A	G	L	P	A	P	V	H	L	F	A	S	G	R	R	A	P	S	R	Y	R	D	D	D	V	R	G	A	S	D	E	R	L	V	A	E	L	R
Template Known Secondary structure												T	G	G	G	.	.	T	T	S								T																	T					S						S				T	T					S		T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210																													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	S	C	A	L	M	Y	A	S	N	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	P	T	L	I	D	Q	G	D	N	D	Q	F	L	A	D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	P	M	T	L	R	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		K	L	G	G	S	D	A	A	X	L	A	D	P	E	L	L	A	X	V	L	P	A	I	R	S	D	Y	R	A	V	E	T	Y	R	H	E	P	G	R	R	V	D	C	P	V	T	V	F	T	G	D	H	D	P	R	V	S	V	G	.	.	.	.	E	A	R	A	W	E	E	H	T	T	G	P	A	D	L	R	V
Template Known Secondary structure													S																									T	T			B	S	S								T	T		T	T					.	.	.	.				G	G	G	G	G	B	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	G	Y	D	H	S	Y	Y	F	I	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L
Query Conservation
Alig confidence					.										.	.
Template Conservation					.										.	.
Template Sequence		L	P	G	.	G	H	F	F	L	V	D	Q	A	.	.	A	P	X	I	A	T	X	T	E	K	L
Template Known Secondary structure			S	S	.	S	T	T					T		.	.											T
Template Predicted Secondary structure					.										.	.
Template SS confidence
		224	.	.		.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions