|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | Q | Q | R | W | R | H | D | S | S | T | L | N | C | P | M | T | F | S | I | F | L | P | P | P | R | D | H | T | P | P | P | V | L | Y | W | L | S | G | L | T | C | N | D | E | N | F | T | T | K | A | G | A | Q | R | V | A | A | E | L | G | I | V | L | V | M | P | D | T | S | P | R | G | E | K | V | A | N | D | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
| . |
|   |   |
|   |   |   |
|   |   |
|   |   | . | . |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
E | C | Y | D | L | Y | F | T | G | V | R | . |
G | A | R | I | H | A | K | Y | I | K | P | K | T | . |
. |
E | G | K | H | P | A | L | I | R | F | H | G | Y | S | S | N | S | G | D | W | N | D | K | . |
. |
. |
. |
L | N | Y | V | A | A | G | F | T | V | V | A | M | D | V | R | G | Q | G | G | Q | S | Q | D | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| G | G | . | G |
|  |  |  |  |  |  |  |  |  | S |
| . | . | S | S |
|  |  |  |  |  |  |  |
|
| T | T |
|
| S |
|
| S | G | G | G | . | . | . | . |  |  |  |  | T | T | T |
|  |  |  |  |  |
|
| T | T | S | S | S | S |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
  |   |
93 | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | D | L | G | Q | G | A | . |
. |
G | F | Y | L | N | A | T | Q | P | P | W | A | T | H | Y | R | M | Y | D | Y | L | R | D | E | L | P | A | L | V | Q | S | Q | F | N | V | S | D | R | C | A | I | S | G | H | S | M | G | G | H | G | A | L | I | M | A | L | K | N | P | G | K | Y | T | S | V | S | A | F | A | P |
Query Conservation |   |
  |   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | V | T | G | N | T | L | N | G | H | I | I | R | G | L | D | D | D | A | D | N | M | L | F | R | H | I | F | L | D | T | A | Q | L | A | G | I | V | M | N | M | P | E | V | D | E | D | R | V | G | V | M | G | P | S | Q | G | G | G | L | S | L | A | C | A | A | L | E | P | R | V | R | K | V | V | S | E | Y | P | F |
Template Known Secondary structure |   |
|
| S | S |
|
| S | S |
| S | S | S | T | T | T | T | S |
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  | S |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
  |   |
171 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | N | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | S | V | P | W | G | I | K | A | F | S | S | Y | L | G | E | D | K | N | A | W | L | E | W | D | S | C | A | L | M | Y | A | S | N | A | Q | D | A | I | P | T | L | I | D | Q | G | D | N | D | Q | F | L | A | D | Q | L | Q | P | A | V | L | A | E | A |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|
|   |   | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
L | S | D | Y | K | R | V | W | D | L | D | L | A | K | N | A | Y | Q | E | I | T | D | Y | F | R | L | F | D | P | R | H | E | R | E | N | E | V | F | T | K | L | G | Y | I | D | V | K | N | L | A | K | R | I | K | G | D | V | L | M | C | V | G | L | M | D | Q | V | C | P | P | S | . |
. |
. |
. |
T | V | F | A | A |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  | T | T |
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |
| T | T |
| T | T |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  | G | G | G |
|
| S |  |  |  |  |  |  |  | T | T |
| S | S | S |
|  |  | . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | |
|
|
|
. | 280 | . | . | . |
  |
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | Q | K | A | W | P | M | T | L | R | I | Q | P | G | Y | D | H | S | Y | Y | F | I | A | S | F | I | E | D | H | L | R | F | H | A | Q | Y | L |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   | . | . |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |
Template Sequence |   |
Y | N | N | I | Q | S | K | K | D | I | K | V | Y | P | D | Y | G | H | E | P | M | . |
. |
R | G | F | G | D | L | A | M | Q | F | M | L | E | L | Y |
Template Known Secondary structure |   |
 |  | T |
|
| S | S |  |  |  |  |  |  | T | T |
|
| S | S |
|
| . | . | T | T |  |  |  |  |  |  |  |  |  | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
284 | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
|
. | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |