Job Description P33018 Confidence 99.56% Date Thu Jan 5 11:50:53 GMT 2012 Rank 139 Aligned Residues 205 % Identity 19% Template c3e0xB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lipase-esterase related protein; PDBTitle: the crystal structure of a lipase-esterase related protein2 from clostridium acetobutylicum atcc 824 Resolution 1.45 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E	K	V	A	N	D	D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	P	P	W	A	T	H	Y	R	M	Y
Query Conservation
Alig confidence																															.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	K	S	P	N	T	L	L	F	V	H	G	S	G	C	N	L	K	I	F	G	E	L	E	K	Y	L	E	.	.	.	.	.	D	Y	N	C	I	L	L	D	L	K	G	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	K	G	Q	C	P	S	T	V	Y	G	Y	I
Template Known Secondary structure			T	T		S									T	T			G	G	G	G	T	T	G	G	G	G		T	.	.	.	.	.	T	S								T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S				S	S
Template Predicted Secondary structure																															.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50																				.	.	.	.	.	.	.	.	.	60	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	L	R	D	E	L	P	A	L	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	Y	T	S	V	S	A	F	A	P	I	V	N	P	C	S	V	P	W	G	I	K	A	F	S	S	Y	L	G	E	D	K	N	A	W	L	E	W
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		D	N	V	A	N	F	I	T	N	S	E	V	T	K	.	.	H	Q	K	N	I	T	L	I	G	Y	S	X	G	G	A	I	V	L	G	V	A	L	K	K	L	P	N	V	R	K	V	V	S	L	S	G	G	A	R	F	D	K	L	D	K	D	F	X	E	K	I	Y	H	N	Q	L	D	N	N	Y	L	L	E	C
Template Known Secondary structure												T	T	T	T	.	.	T		S								T												T	T		T	T								S			S	B		T	T	S										T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		199																														200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	A	L	M	Y	A	S	N	A	Q	D	A	I	P	T	L	I	D	Q	G	D	N	D	Q	F	L	A	D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	P	M	T	L	R
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.	.
Template Conservation																																																														.											.	.	.	.
Template Sequence		I	G	G	I	D	N	P	L	S	E	K	Y	F	E	T	L	E	K	D	P	D	I	X	I	N	D	L	I	A	C	K	L	I	D	L	V	D	N	L	K	N	I	D	I	P	V	K	A	I	V	A	K	D	E	L	L	T	L	V	E	.	Y	S	E	I	I	K	K	E	V	E	.	.	.	.	N	S	E	L	K
Template Known Secondary structure			T		S		S								T	T	S		S	S															B		G	G	G	G	G	G			S								T	T		S	S	S				.										S	.	.	.	.	S
Template Predicted Secondary structure																																																														.											.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.					.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	P	G	Y	D	H	S	Y	Y	F	I	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		I	F	E	T	G	K	H	F	L	L	V	V	N	A	.	.	K	G	V	A	E	E	I	K	N	F	I
Template Known Secondary structure				S	S		G	G	G					T		.	.									T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions