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Job DescriptionP33018
Confidence99.74%DateThu Jan 5 11:50:53 GMT 2012
Rank112Aligned Residues216
% Identity20%Templatec3dyvA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:esterase d; PDBTitle: snapshots of esterase d from lactobacillus rhamnosus:2 insights into a rotation driven catalytic mechanism
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.... .40.........50.........60.........70.........80.........90.........100.........110..
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Query Sequence  LPPPR. DHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWA
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Template Sequence  KPQPFEYEGTDTGVVLLHAYTGSPNDMNFMA. . . RALQRSGYGVYVPLFSGHG. . . . . . . . . . . . . . . . . . . . TVEPLDI
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   5....10.........20.........30..... ....40.........50.... .....60.
 
   113......120.........130.........140.........150.........160.........170.......
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Query Sequence  THYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSV. . . . . . . . . . . . . . .
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Template Sequence  LTKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRL
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   62.......70.........80.........90.........100.........110.........120.........130.........140.
 
   178.180.........190.........200.........210.........220.........230.........240.........250......
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Query Sequence  . PWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDH
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Template Sequence  AGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGR. LAYQLRDALINAA. RVDFHWYDDAKH
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   142.......150.........160.........170.........180.........190.... .....200....... ..210.........
 
   257.. 260.........270....
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Query Sequence  SYY. . . FIASFIEDHLRFHAQ
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Template Sequence  VITVNSAHHALEEDVIAFMQQ
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   220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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