Job Description P33018 Confidence 99.39% Date Thu Jan 5 11:50:53 GMT 2012 Rank 182 Aligned Residues 214 % Identity 19% Template c3bf7B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:esterase ybff; PDBTitle: 1.1 resolution structure of ybff, a new esterase from2 escherichia coli: a unique substrate-binding crevice3 generated by domain arrangement Resolution 1.10 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	T	F	S	I	F	L	P	P	P	R	D	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E	K	V	A	N	D	D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A
Query Conservation
Alig confidence																		.	.																				.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																				.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	N	I	R	A	Q	T	A	Q	N	Q	H	N	N	S	.	.	P	I	V	L	V	H	G	L	F	G	S	L	D	N	L	G	V	L	A	.	.	.	R	D	L	V	N	.	D	H	N	I	I	Q	V	D	V	R	N	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S
Template Known Secondary structure											S	S						.	.								T	T			T	T	T	T					.	.	.				T	T	.	T	S								T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																		.	.																				.	.	.						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.																				.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	P	P	W	A	T	H	Y	R	M	Y	D	Y	L	R	D	E	L	P	A	L	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	Y	T	S	V	S	A	F	A	P	I	V	N	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		P	R	E	P	V	M	N	Y	P	A	M	A	Q	D	L	V	D	T	L	D	A	L	.	.	.	.	.	.	Q	I	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	P	D	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V	R	R	H	D	E	I	F	A	A
Template Known Secondary structure					S																			.	.	.	.	.	.	T		S								T														G	G	G								S			S	S				S
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
																													175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	S	V	P	W	G	I	K	A	F	S	S	Y	L	G	E	D	K	N	A	W	L	E	W	D	S	C	A	L	M	Y	A	S	N	A	Q	D	A	I	P	T	L	I	D	Q	G	D	N	D	Q	F	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	A	V	S	E	S	D	A	Q	T	R	Q	Q	A	A	A	I	M	R	Q	H	L	N	E	E	G	V	I	Q	F	L	L	K	S	F	V	D	G	E	W	R	F	N	V	P	V	L	W	D	Q	Y	P	H	I	V	G	W	E	K	I	P	A	W	D	H	P	A	L	F	I	P	G	G	N	S	P	Y	V	S
Template Known Secondary structure								S				S									T	T	T												T	T			T	T			S	S								T															S							B	T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	P	M	T	L	R	I	Q	P	G	Y	D	H	S	Y	Y	F	I	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L	L	K
Query Conservation
Alig confidence				.											.	.	.	.																				.	.
Template Conservation				.											.	.	.	.																				.	.
Template Sequence		E	Q	.	Y	R	D	D	L	L	A	Q	F	P	.	.	.	.	Q	A	R	A	H	V	I	A	G	A	G	H	W	V	H	A	E	K	P	.	.	D	A	V	L	R	A	I	R	R	Y	L	N	D
Template Known Secondary structure		G	G	.	G									T	.	.	.	.	T						B	T	T			S								.	.
Template Predicted Secondary structure				.											.	.	.	.																				.	.
Template SS confidence
		211	.		.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions