Job Description P33018 Confidence 99.94% Date Thu Jan 5 11:50:53 GMT 2012 Rank 42 Aligned Residues 228 % Identity 16% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		N	C	P	M	T	F	S	I	F	L	P	P	P	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	P	P	P	V	L	Y	W	L	S	G	L	T	C	.	.	.	N	D	E	N	F	T	T	K	A	G	A	Q	R	V	A	A	E	L	G	I	V	L	V	M	P	D	T	S	P	R	G	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		R	I	N	L	L	S	R	V	Y	R	P	A	Y	A	D	Q	E	Q	P	P	S	I	L	D	L	E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V	S	V	N	.	.	.	.	.	.
Template Known Secondary structure		T	T	T											T	T		S	S				T	T	S	T	T					S	S	S										S	T	T	T	S			T	T	B															T	S							.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																												.	.																																		.	.	.
Query SS confidence																																												.	.																																		.	.	.
Query Sequence		K	V	A	N	D	D	G	Y	D	L	G	Q	G	A	G	F	Y	L	N	A	T	Q	P	P	W	A	T	H	Y	R	M	Y	D	Y	L	R	D	E	L	P	A	L	.	.	V	Q	S	Q	F	N	V	S	D	R	C	A	I	S	G	H	S	M	G	G	H	G	A	L	I	M	A	L	K	N	P	G	K	.	.	.
Query Conservation																																												.	.																																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	R	A	P	E	N	P	Y	P	C	A	Y	D	D	G	W	I	A	L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	S		T	T															T		G	G	G			T	T	T	S	S									T															T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	S	V	S	A	F	A	P	I	V	N	P	C	S	V	P	W	G	I	K	A	F	S	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	E	D	K	N	A	W	L	E	W	D	S	C	A	L	M	Y	A	S	N	A	Q	D	A	I	P	T	L	I	D	Q	G	D	N	D	Q
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S	P	R	G	K	S	L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L
Template Known Secondary structure									S						S	S									T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T	S				T	T												T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		F	L	A	D	Q	L	Q	P	A	V	L	A	E	A	A	R	Q	K	A	W	P	M	T	L	R	I	Q	P	G	Y	D	H	S	Y	Y	F	I	.	.	A	S	F	I	E	D	H	L	R	F	H	A	Q	Y	L	L
Query Conservation																																							.	.
Alig confidence					.	.	.																																.	.
Template Conservation					.	.	.
Template Sequence		I	R	D	.	.	.	W	Q	L	A	Y	A	E	G	L	K	K	A	G	Q	E	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V	N
Template Known Secondary structure		T			.	.	.												T	T									T	T			T	T	T	T	S	S	S		S
Template Predicted Secondary structure					.	.	.
Template SS confidence
		291	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions