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Job DescriptionP33018
Confidence99.75%DateThu Jan 5 11:50:53 GMT 2012
Rank109Aligned Residues248
% Identity15%Templatec1mpxB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50... ......60.........70.........80......
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Query Sequence  QRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLT. . . . . . . . CNDENFTTKAGAQRVAAELGIVLVMPDTSPRGE
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Template Sequence  REVXIPXRD. GVKLHTVIVLPKG. . AKNAPIVLTRTPYDASGRTERLASPHXKDLLSAGDDVFVEGGYIRVFQDVRGKYG
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TT.S
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SSS
T
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S
S
GGGTT

TTSTT
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   48.50...... ...60......... 70.........80.........90.........100.........110.........120....
 
   87..90.........100.........110.........120.........130.. .......140.........150.........160.....
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Query Sequence  KVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQ. FNVSDRCAISGHSMGGHGALIMALKNPGKYTSV
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Template Sequence  SEGDYVXTRPL. . . . . . . . . . RGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGXIGSSYEGFTVVXALTNPHPALKVA
Template Known Secondary structure 

S


TT


..........SBTTB
SS


TTTTS

TT
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   125....130..... ....140.........150.........160.........170.........180.........190....
 
   166...170.... .....180.........190........
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Query Sequence  SAFAPIVNP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CSVPWGIKAFSSYLGEDKNAWLEW
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Template Sequence  VPESPXIDGWXGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEH
Template Known Secondary structure  S



TTTTSSSTTBGGGSSSS






SSS

STTGGGST
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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   199200...... ...210.........220........ .230.........240.........250.........260
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Query Sequence  DSCALMYA. . . . . . . . SNAQDAIPTLIDQGDNDQFLAD. QLQPAVLAEAARQKAWPMTLRIQPGYDHSYYF. . . . . . . . .
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Template Sequence  AAYDAFWQEQALDKVXARTPLKVPTXWLQGLWDQEDXWGAIHSYAAXEPRDKRNTLNYLVXGPW. RHSQVNYDGSALGAL
Template Known Secondary structure 
SS
TT
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S
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SSGGG
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STT
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   275....280.........290.........300.........310.........320.........330........ .340.........350...
 
   261........270......
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Query Sequence  . . . . . . . IASFIEDHLRFHAQYL
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Template Sequence  NFEGDTARQFRHDVLRPFFDQYL
Template Known Secondary structure 
SS
T
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   354.....360.........370......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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