Job Description P0AB26 Confidence 4.50% Date Thu Jan 5 11:14:27 GMT 2012 Rank 34 Aligned Residues 94 % Identity 13% Template c3h4zC_ PDB info PDB header:allergen Chain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein Resolution 2.35 Å

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		53	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																														.	.
Query SS confidence										.	.	.	.																																														.	.
Query Sequence		D	A	H	I	V	L	T	N	.	.	.	.	L	T	S	Q	I	G	R	E	E	P	N	K	V	T	L	T	G	D	A	N	L	D	M	N	S	L	F	G	S	Q	K	A	T	M	K	L	K	L	K	A	L	P	V	F	D	.	.	K	E	K	G	A	I	F	L	K	E	M	E	V	V	D	A	T	V	Q	P	E
Query Conservation										.	.	.	.																																														.	.
Alig confidence										.	.	.	.							.																																							.	.																					.
Template Conservation																				.																																																													.
Template Sequence		D	A	N	V	K	S	E	D	G	V	V	K	A	H	L	L	V	G	.	V	H	D	D	V	V	S	M	E	Y	D	L	A	Y	K	P	N	T	H	V	I	S	D	I	Q	D	F	V	V	E	L	S	L	E	V	S	E	E	G	N	M	T	L	T	S	F	E	V	R	Q	F	A	N	V	V	N	H	I	G	G	.
Template Known Secondary structure									T	T										.			S	S																					S	S											T	T														S							T	T	.
Template Predicted Secondary structure																				.																																																													.
Template SS confidence
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.		.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	Q	T	V	M	Q	T	L	L	P	Y	L	N	Q	A	L	R	N	Y	F	N	Q	Q
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	S	I	L	D	P	I	F	A	V	L	S	D	V	L	T	A	I	F	Q	D	T
Template Known Secondary structure		.	.			T	T																T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				1172	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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