Job Description P37195 Confidence 99.95% Date Thu Jan 5 11:55:01 GMT 2012 Rank 4 Aligned Residues 172 % Identity 12% Template c3klnC_ PDB info PDB header:transcription Chain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst Resolution 3.08 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.																.	.	.	.	.
Query SS confidence																								.	.																.	.	.	.	.
Query Sequence		F	L	I	I	T	R	D	T	M	F	F	T	A	M	K	N	I	L	S	K	G	N	.	.	V	V	H	I	Q	N	E	E	E	I	D	V	M	L	H	.	.	.	.	.	Q	N	A	F	V	I	I	D	T	L	M	N	N	V	F	H	S	N	F	L	T	Q	I	E	R	L	K	P	V	H	V	I	I	F	S	P
Query Conservation																								.	.																.	.	.	.	.
Alig confidence																								.	.																.	.	.	.	.
Template Conservation
Template Sequence		V	R	M	L	S	D	V	C	M	Q	S	R	L	L	K	E	A	L	E	S	K	L	P	L	A	L	E	I	T	P	F	S	E	L	W	L	E	E	N	K	P	E	S	R	S	I	Q	M	L	V	I	D	Y	S	R	I	S	D	D	V	L	T	D	Y	S	S	F	K	H	I	S	C	P	D	A	K	E	V	I	I
Template Known Secondary structure						S			S														S	S								G	G	G	G	G	G	T	T	T		S	G	G	G	G								G	G	G			T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
								75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																								.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	N	I	K	R	C	L	G	K	V	P	V	T	F	V	P	R	T	I	T	I	I	D	F	V	A	L	I	N	G	S	Y	C	S	V	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	V	S	L	S	R	K	Q	H	Q	V	L	S
Query Conservation		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	C	P	Q	D	I	E	H	K	L	L	F	K	W	N	N	L	A	G	V	F	Y	I	D	D	D	M	D	T	L	I	K	G	M	S	K	I	L	Q	D	E	M	W	L	T	R	K	L	A	Q	E	Y	I	L	H	Y	R	A	G	N	S	V	V	T	S	Q	M	Y	A	K	L	T	K	R	E	Q	Q	I	I	K
Template Known Secondary structure					S	S			G	G	G	G	G	G	S	T	T							T	T															T	T			B																T							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	A	N	Q	M	T	T	E	D	I	L	E	K	L	K	I	S	L	K	T	F	Y	C	H	K	H	N	I	M	M	I	L	N	L	K	R	I	N	E	L	V	R	H	Q	H	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	G	S	G	A	S	N	I	E	I	A	D	K	L	F	V	S	E	N	T	V	K	T	H	L	H	N	V	F	K	K	I	N	A	K	N	R	L	Q	A	L	I	W	A	K	N	N
Template Known Secondary structure					T	T								T	T	T	T																		T		S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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