Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence99.17%DateThu Jan 5 11:55:01 GMT 2012
Rank99Aligned Residues103
% Identity12%Templatec3grcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. ........30........ .40.........50.........60... ......70....
Predicted Secondary structure 



..






..










...




Query SS confidence 



















. .
















. .
























. . .










Query Sequence  FLIITRDTMFFTAMKNILSK. . GNVVHIQNEEEIDVMLH. . QNAFVIIDTLMNNVFHSNFLTQIER. . . LKPVHVIIFSP
Query Conservation 




 
     

  

  ..   
       
     ..    



              
  ...      

   
Alig confidence 



















..
















..
























...










Template Conservation 





       
   
   
  
        
   
     



 
       
      

          
 
  
Template Sequence  ILICEDDPDIARLLNLXLEKGGFDSDXVHSAAQALEQVARRPYAAXTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSA
Template Known Secondary structure 
SSTT
SSTTS

S
SS
SSS
STTSTT

T
Template Predicted Secondary structure 


























Template SS confidence 















































































   550.........560.........570.........580.........590.........600.........610.........620.........
 
   75.... 80.........90.........100....
Predicted Secondary structure 

.....







Query SS confidence 




. . . . .
























Query Sequence  FNIKR. . . . . CLGKVPVTFVPRTITIIDFVALING
Query Conservation       .....    
    
 
      
   
  
Alig confidence 




.....
























Template Conservation                
    
 

     
   
  
Template Sequence  NAREGELEFNSQPLAVSTWLEKPIDENLLILSLHR
Template Known Secondary structure  TTTT
TTSSS
SS

Template Predicted Secondary structure 










Template SS confidence 


































   630.........640.........650.........660....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions