Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence81.30%DateThu Jan 5 11:55:01 GMT 2012
Rank325Aligned Residues42
% Identity19%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160...
Predicted Secondary structure 









Query SS confidence 













































Query Sequence  RKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRI
Query Conservation   

  

 

  
 





  
 

 


  
   
  

 
   
Alig confidence 
































....








Template Conservation 

  
  

    

   

  


 
 

  
....


 

   
Template Sequence  EKIFIEEKLREYDYDLKRTAEEIGIDLSNLYRK. . . . IKSLNIRVK
Template Known Secondary structure  TTT
TT

....TT



Template Predicted Secondary structure 





....




Template SS confidence 













































   36...40.........50.........60........ .70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions