Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence99.75%DateThu Jan 5 11:55:01 GMT 2012
Rank15Aligned Residues64
% Identity27%Templatec3cloC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160.........170......
Predicted Secondary structure 


















Query SS confidence 































































Query Sequence  AVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV
Query Conservation     

 

  

 

  
 





  
 

 


  
   
  

 
    


 
       
Alig confidence 































































Template Conservation     

  
  

     
     

  
 

  

         
       
    
   


Template Sequence  RNILSEREKEILRCIRKGLSSKEIAATLYISVNTVNRHRQNILEKLSVGNSIEACRAAELXKLL
Template Known Secondary structure  TTSS
T

TT

T
SSTT

Template Predicted Secondary structure 




















Template SS confidence 































































   194.....200.........210.........220.........230.........240.........250.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions