Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence99.14%DateThu Jan 5 11:55:01 GMT 2012
Rank105Aligned Residues105
% Identity11%Templatec3cg0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:response regulator receiver modulated diguanylate cyclase PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. .... ....30........ .40.........50 .........60.........70....
Predicted Secondary structure 



..


.



..






.








.
Query SS confidence 



















. .



.












. .











.























.
Query Sequence  FLIITRDTMFFTAMKNILSK. . GNVV. HIQNEEEIDVMLH. . QNAFVIIDTLMN. NVFHSNFLTQIERLKPVHVIIFSP.
Query Conservation 




 
     

  

  ..   
.       
     ..    



    .          
        

   .
Alig confidence 



















..



.












..











.























.
Template Conservation 





       
   
   
  
   
     

        
 
  
        
             


  
  
Template Sequence  VLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSS
Template Known Secondary structure 


T
SS

SSS

SSS
S





Template Predicted Secondary structure 














































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   75....80.........90.........100......
Predicted Secondary structure  ...









Query SS confidence  . . .































Query Sequence  . . . FNIKRCLGKVPVTFVPRTITIIDFVALINGSY
Query Conservation  ...         
    
 
      
   
    
Alig confidence  ...































Template Conservation              
    
 

     
   
   
Template Sequence  QDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAI
Template Known Secondary structure 

TT

S



SS

Template Predicted Secondary structure 









Template SS confidence 


































   90.........100.........110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions