Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence99.32%DateThu Jan 5 11:55:01 GMT 2012
Rank58Aligned Residues103
% Identity8%Templatec2qv0A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30........ .40.........50.........60.........70....
Predicted Secondary structure 





....




..















.
Query SS confidence 





















. . . .














. .



































.
Query Sequence  FLIITRDTMFFTAMKNILSKGN. . . . VVHIQNEEEIDVMLH. . QNAFVIIDTLMNNVFHSNFLTQIERLKPVHVIIFSP.
Query Conservation 




 
     

  

    .... 
       
     ..    



              
        

   .
Alig confidence 





















....














..



































.
Template Conservation 





       
   
        
  
    


        


  
  
    
      
        

  
 
Template Sequence  VIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITA
Template Known Secondary structure 
S
S

S



S
SS
SSS
TTSTT

S
Template Predicted Secondary structure 

























Template SS confidence 















































































   60.........70.........80.........90.........100.........110.........120.........130.........
 
   75....80.........90.........100....
Predicted Secondary structure  ..









Query SS confidence  . .





























Query Sequence  . . FNIKRCLGKVPVTFVPRTITIIDFVALING
Query Conservation  ..         
    
 
      
   
  
Alig confidence  ..





























Template Conservation         
   

  

 

     
   
  
Template Sequence  WKEHAVEAFELEAFDYILKPYQESRIINMLQK
Template Known Secondary structure 

TTTT
SSS

Template Predicted Secondary structure 








Template SS confidence 































   140.........150.........160.........170.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions