Return to main results Retrieve Phyre Job Id

Job DescriptionP37195
Confidence99.71%DateThu Jan 5 11:55:01 GMT 2012
Rank18Aligned Residues69
% Identity19%Templatec2krfB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulatory protein coma; PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170......
Predicted Secondary structure 























Query SS confidence 




































































Query Sequence  SVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV
Query Conservation          

 

  

 

  
 





  
 

 


  
   
  

 
    


 
       
Alig confidence 




































































Template Conservation 
       

  
  

   
 
 
 



  
 

  

      
  



     

  
   


Template Sequence  SSQKEQDVLTPRECLILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL
Template Known Secondary structure 

S
SSSSS
TTS
T

S

SSST

Template Predicted Secondary structure 
























Template SS confidence 




































































   146...150.........160.........170.........180.........190.........200.........210....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions