 |
Job Description | P37195 | Confidence | 68.05% | Date | Thu Jan 5 11:55:01 GMT 2012 |
Rank | 407 | Aligned Residues | 51 |
% Identity | 14% | Template | c2cmpA_ |
PDB info |
PDB header:terminase | Chain: A: PDB Molecule:terminase small subunit; |
PDBTitle: crystal structure of the dna binding domain of g1p small2 terminase subunit from bacteriophage sf6
|
Resolution | 1.58 Å |
|
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | S | R | K | Q | H | Q | V | L | S | . |
C | I | A | N | Q | M | T | T | E | D | I | L | E | K | L | K | I | S | L | K | T | F | Y | C | H | K | H | N | I | M | M | I | L | N | L | K | R | I | N | E |
Query Conservation |   |
  |
|
|   |
|
|   |   |
|
|   | . |
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
K | L | S | P | K | Q | E | R | F | I | E | E | Y | F | I | N | D | M | N | A | T | K | A | A | I | A | A | G | Y | S | K | N | S | A | S | A | I | G | A | E | N | L | Q | K | P | A | I | R | A | R | I | D |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |  | T | T |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|