Job Description P37195 Confidence 99.97% Date Thu Jan 5 11:55:01 GMT 2012 Rank 2 Aligned Residues 174 % Identity 17% Template c1rnlA_ PDB info PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																								.	.	.	.																.	.																																					.
Query SS confidence																								.	.	.	.																.	.																																					.
Query Sequence		F	L	I	I	T	R	D	T	M	F	F	T	A	M	K	N	I	L	S	K	G	N	.	.	.	.	V	V	H	I	Q	N	E	E	E	I	D	V	M	L	H	.	.	Q	N	A	F	V	I	I	D	T	L	M	N	N	V	F	H	S	N	F	L	T	Q	I	E	R	L	K	P	V	H	V	I	I	F	S	P	.
Query Conservation																								.	.	.	.																.	.																																					.
Alig confidence																								.	.	.	.																.	.																																					.
Template Conservation
Template Sequence		I	L	L	I	D	D	H	P	M	L	R	T	G	V	K	Q	L	I	S	M	A	P	D	I	T	V	V	G	E	A	S	N	G	E	Q	G	I	E	L	A	E	S	L	D	P	D	L	I	L	L	D	L	N	M	P	G	M	N	G	L	E	T	L	D	K	L	R	E	K	S	L	S	G	R	I	V	V	F	S	V
Template Known Secondary structure							S														T		T	T								S	S														S						T	T		G	G	G										T	T	S				S							S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
						75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	F	N	I	K	R	C	L	G	K	V	P	V	T	F	V	P	R	T	I	T	I	I	D	F	V	A	L	I	N	G	S	Y	C	S	V	P	E	A	A	V	S	.	.	.	.	.	.	.	.	.	.	L	S	R	K	Q	H	Q	V	L	S	C	I	A	N	Q	M	T	T	E	D	I	L	E	K	L
Query Conservation		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	H	E	E	D	V	V	T	A	L	K	R	G	A	D	G	Y	L	L	K	D	M	E	P	E	D	L	L	K	A	L	H	Q	A	A	A	G	E	M	V	L	S	E	A	L	T	P	V	L	A	A	S	L	Q	L	T	P	R	E	R	D	I	L	K	L	I	A	Q	G	L	P	N	K	M	I	A	R	R	L
Template Known Secondary structure			S											T	T		S					T	T	S															S						T	T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	S	L	K	T	F	Y	C	H	K	H	N	I	M	M	I	L	N	L	K	R	I	N	E	L	V	R	H	Q	H	I	D	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K	L	K	S	R	V	E	A	A	V	W	V	H	Q	E	R	I
Template Known Secondary structure		T																	T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions