Job Description P37195 Confidence 97.09% Date Thu Jan 5 11:55:01 GMT 2012 Rank 148 Aligned Residues 44 % Identity 18% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		S	L	S	R	K	Q	H	Q	V	L	S	C	I	.	.	.	.	.	A	N	Q	M	T	T	E	D	I	L	E	K	L	K	I	S	L	K	T	F	Y	C	H	K	H	N	I	M	M	I	L
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L
Template Known Secondary structure		S	S		T	T	T	T					T	T	S	S	T	T	S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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