Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACZ8
Confidence62.97%DateThu Jan 5 11:19:31 GMT 2012
Rank255Aligned Residues36
% Identity22%Templated1or7a1
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190.........200..
Predicted Secondary structure 












Query SS confidence 








































Query Sequence  FLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKI
Query Conservation 
        
   
   
          

   
 


 

Alig confidence 

















.....

















Template Conservation    
    
 
  


  
.....
 
  

   
 

   
Template Sequence  ITLRELDGLSYEEIAAIM. . . . . DCPVGTVRSRIFRAREAI
Template Known Secondary structure  TT


T.....TS
Template Predicted Secondary structure 



.....


Template SS confidence 








































   146...150.........160... ......170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions