Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACZ8
Confidence99.74%DateThu Jan 5 11:19:31 GMT 2012
Rank113Aligned Residues100
% Identity36%Templatec2hwvA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily.
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.........170.........180.........190.........200....
Predicted Secondary structure 















































.
Query SS confidence 














































































.
Query Sequence  SQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDN.
Query Conservation                           
   
   
  
        
   
   
          

   
 


 

  .
Alig confidence 














































































.
Template Conservation 
 
  
    
     
      
 

  
  

  
       

   
   

          
   
 





   
Template Sequence  SHMTIGDLTIHPDAYMVSKRGEKIELTHREFELLYYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDS
Template Known Secondary structure 

TT
SSSSTT

TTT

B
T
GGGTT

SS
Template Predicted Secondary structure 























Template SS confidence 















































































   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   205....210.........220.....
Predicted Secondary structure 











Query SS confidence 




















Query Sequence  DFEPKLIQTVRGVGYMLEVPD
Query Conservation        
 

 
 

 
    
Alig confidence 




















Template Conservation        
 

 
 

 
  

Template Sequence  PSHPTYLVTRRGVGYYLRNPE
Template Known Secondary structure  TTS
SSTTT



Template Predicted Secondary structure 












Template SS confidence 




















   212.......220.........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions