 |
Job Description | P0ACZ8 | Confidence | 98.15% | Date | Thu Jan 5 11:19:31 GMT 2012 |
Rank | 130 | Aligned Residues | 86 |
% Identity | 20% | Template | c2ff4B_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:probable regulatory protein embr; |
PDBTitle: mycobacterium tuberculosis embr in complex with low affinity2 phosphopeptide
|
Resolution | 1.90 Å |
|
 |
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | |
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
K | V | T | R | S | G | T | R | I | T | L | . |
T | S | K | E | F | T | L | L | E | F | F | L | R | H | Q | G | E | V | L | P | R | S | L | I | A | S | Q | V | W | D | M | N | F | D | S | D | T | N | . |
A | I | D | V | A | V | K | R | L | R | G | K | I | D | N | D | F | E | P | K | L | . |
. |
I | Q | T | V | R | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . |
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   | . | . |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
Q | M | T | I | D | G | T | P | V | P | S | G | T | P | K | Q | R | A | V | L | A | M | L | V | I | N | R | N | R | P | V | G | V | D | A | L | I | T | A | L | W | E | E | W | P | P | S | G | A | R | A | S | I | H | S | Y | V | S | N | L | R | K | L | L | G | G | A | G | I | D | P | R | V | V | L | A | A | A | P | P |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T | S |
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | Y | M | L | E | V | P | D | G | Q |
Query Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
. |
G | Y | R | L | S | I | P | D | N | T |
Template Known Secondary structure |   |
. |  |  |  |  |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|