Job Description P0ACZ8 Confidence 21.58% Date Thu Jan 5 11:19:31 GMT 2012 Rank 497 Aligned Residues 80 % Identity 18% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		G	E	Y	L	T	K	G	L	T	E	A	G	F	V	V	D	L	A	D	N	G	.	.	.	.	.	.	.	L	N	G	Y	H	L	A	M	T	G	D	Y	D	L	I	I	L	D	I	M	L	P	D	V	N	G	W	.	.	.	.	.	.	D	I	V	R	M	L	R	S	A	N	K	G	M	P	I	L	L	L	T
Query Conservation																							.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	P	N	N	Q	N	P	I	E	I	A	K	K	G	V	D	I	F	V	K	N	K	M	D	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	T	K	L	L	E	E	M	K	E	M	Y	D	V	L	K	P	D	D	V	I	L	V	I	D
Template Known Secondary structure												T	T							S	S				T	T													T	T		S									S			S	S	T																		S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	T	I	E	H	R	V	K	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	G	Q	K	A	Y	D	L	A	S	R
Template Known Secondary structure		T	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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