Job Description P0AFH2 Confidence 99.75% Date Thu Jan 5 11:26:15 GMT 2012 Rank 7 Aligned Residues 201 % Identity 12% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		V	A	S	S	F	P	V	S	A	K	L	G	A	A	A	F	F	L	A	V	I	L	G	V	S	A	G	V	I	A	A	L	K	Q	N	T	K	W	D	Y	T	V	M	G	L	A	M	T	G	V	V	I	P	S	F	V	V	A	P	L	L	V	M	I	F	A	I	I	L	H	W	L	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																		.																																								.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	.	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F
Template Known Secondary structure																																T		.	S	S	S	T	T								T	T					S													T		S	S	S	S									T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
			162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	G	G	G	W	N	G	G	A	L	K	F	M	I	L	P	M	V	A	L	S	L	A	Y	I	A	S	I	A	R	I	T	R	G	S	M	I	E	V	L	H	S	N	F	I	R	T	A	R	A	K	G	L	P	M	R	R	I	I	L	R	H	A	L	K	P	A	L	L	P	V	L	S	Y	M	G	P	A	F
Query Conservation		.
Alig confidence		.																																				.
Template Conservation																																						.
Template Sequence		G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	.	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F
Template Known Secondary structure		S					T	T	T	S																												.	G	G	G	S		T									T				S							T	T	G	G	G	T
Template Predicted Secondary structure																																						.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.															.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		V	G	I	I	T	G	S	M	V	I	E	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	L	P	G	I	G	Q	L	F	V	N	G	A	L	N	R	.	.	.	.	D	Y	S	L	V	L	S	L	T	I	L	V	G	A	L	T	I	L	F	N	A	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure						T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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