Job Description P0AE16 Confidence 3.05% Date Thu Jan 5 11:22:15 GMT 2012 Rank 10 Aligned Residues 180 % Identity 6% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		G	V	V	N	K	T	L	G	L	L	A	T	I	V	G	A	L	Y	G	G	I	L	M	Q	R	L	S	L	F	R	A	L	L	I	F	G	I	L	Q	G	A	S	N	A	G	Y	W	L	L	S	I	T	D	K	H	L	.	.	Y	S	M	G	A	A	V	F	F	E	N	L	C	G	G	M	G	T	S	A	F	V
Query Conservation																																																										.	.
Alig confidence																																																										.	.
Template Conservation
Template Sequence		S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L
Template Known Secondary structure																		T							S		S		S	S																					G	G	G	G	G	G		S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	L	L	M	T	L	C	N	K	S	F	S	A	T	Q	F	A	L	L	S	A	L	S	A	V	G	R	V	Y	V	G	P	V	A	G	W	F	V	E	A	H	G	.	W	S	T	F	Y	L	F	S	V	A	A	A	V	P	G	L	I	L	L	L	V	C	R	Q	T	L	E	Y	T	R	V	N	D	N	F	I	S
Query Conservation																																												.
Alig confidence												.	.	.	.	.	.	.	.																									.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		G	L	F	W	K	K	T	T	S	K	.	.	.	.	.	.	.	.	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S	S
Template Known Secondary structure						T	T					.	.	.	.	.	.	.	.																		T	S	S	S																									T	T		S	S	S	S		T	T							S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.									.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	Y	P	A	G	Y	A	F	A	M	W	T	L	A	A	G	V	S	L	L	A	V	W	L	L	L	L	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	V	T	D	R	S	F	N	I	A	A	Y	G	I	M	I	V	L	A	V	L	Y	T	L	F	W	V	L	Y	K
Template Known Secondary structure							T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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