Return to main results Retrieve Phyre Job Id

Job DescriptionP23721
Confidence99.94%DateThu Jan 5 11:39:37 GMT 2012
Rank75Aligned Residues330
% Identity12%Templated2bwna1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3...... 10.........20.........30.........40.........50.........60.........70........
Predicted Secondary structure 


....





























Query SS confidence 






. . . .




































































Query Sequence  QIFNFSS. . . . GPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRG
Query Conservation      
  ....

   
  
 

    
              

           
  

   
      

  




 
Alig confidence 






....



.



























....


















....








Template Conservation    


 

 



  . 
 
  
   
               
 ....      
   

   
   ....     


 
Template Sequence  DITVWCGNDYLGMGQ. HPVVLAAMHEALEAVGAGSGGTRNISGT. . . . TAYHRRLEAEIAGLHQKEA. . . . ALVFSSAYN
Template Known Secondary structure 
S
S
TTSGGG.

S


SBTTTB

....
TT
S....S
Template Predicted Secondary structure 










.














....




....

Template SS confidence 















































































   47..50.........60. ........70.........80......... 90.........100........ .110.......
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  QFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIA
Query Conservation 
           

 
                   
                               
      

    
Alig confidence 












































.

































Template Conservation 
       
        
      
          
         .
       
          
         
 
  
Template Sequence  ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN. DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP
Template Known Secondary structure  STT
TT

S



TT.
S
TTS
SB
TTT

B

Template Predicted Secondary structure 












.















Template SS confidence 















































































   118.120.........130.........140.........150.........160.. .......170.........180.........190......
 
   159160..... ....170.........180........ .190.........200.........210.........220........
Predicted Secondary structure 

..

















........























Query SS confidence 






. .






















. . . . . . . .







































Query Sequence  IDETPDF. . GADVVVAADFSSTILSRPIDVSR. . . . . . . . YGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDY
Query Conservation     
   ..       

 
   
        ........ 
    
  
  

 
 
 
                    
Alig confidence 






..






















........





































..
Template Conservation     
  
    
  





   
                                

                    ..
Template Sequence  IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAAYGVFGGYIAASARMVDAVRSYAPGFI. .
Template Known Secondary structure  T

TTTTTTSSTTS

T
GGG
S




S



..
Template Predicted Secondary structure 











































..
Template SS confidence 















































































   197..200.........210.........220.........230.........240.........250.........260.........270....
 
   229230.........240.........250.........260.........270.........280.........290.........300........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSA
Query Conservation             
     
  
  

       
          
   
   
               
   
 
      
Alig confidence  ........






















.




























.....













Template Conservation  ........                       .                   
         .....              
Template Sequence  . . . . . . . . FSTSLPPAIAAGAQASIAFLKTA. EGQKLRDAQQMHAKVLKMRLKALGMPIID. . . . . HGSHIVPVVIGDPV
Template Known Secondary structure  ........TSB


TS.T

B

.....
SSS



Template Predicted Secondary structure  ........








.





.....






Template SS confidence 















































































   276...280.........290........ .300.........310.........320....... ..330.........340.
 
   309310...... ...320.........330. ........340.........350........
Predicted Secondary structure 
.









.....






Query SS confidence 







.














. . . . .


























Query Sequence  LDKLFLEE. SFAAGLHALKGHRVV. . . . . GGMRASIYNAMPLEGVKALTDFMVEFE
Query Conservation          .
   

    
    .....
 



     
 


  

  
 
  
Alig confidence 







.














.....


























Template Conservation           
   

 
              

 
     
 



 

 

  
 
Template Sequence  HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW
Template Known Secondary structure 



TTTS
TT




TTS

Template Predicted Secondary structure 


















Template SS confidence 























































   342.......350.........360.........370.........380.........390.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions