Job Description P23721 Confidence 99.75% Date Thu Jan 5 11:39:37 GMT 2012 Rank 212 Aligned Residues 334 % Identity 11% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		2	.	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.	.					.	.	.
Query SS confidence											.	.					.	.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation											.	.					.	.	.
Alig confidence											.	.					.	.	.																								.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.																						.	.
Template Sequence		R	A	I	L	D	F	T	S	G	Q	M	S	A	V	L	G	H	C	H	P	E	I	V	S	V	I	G	E	Y	A	G	K	L	D	H	L	F	S	E	M	L	.	.	.	.	.	.	.	.	.	S	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	G	L	D	R	.	.	A	L	L	L	S	T	G
Template Known Secondary structure							T	T					T		T	T		B	T																				T	T			.	.	.	.	.	.	.	.	.															S		T	T				.	.					S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																						.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.
		77	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	Q	F	A	A	V	P	L	N	I	.	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	.	.	.	.	.	.	.	.	.	.	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																								.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	S	N	E	A	A	I	R	M	A	K	L	V	T	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G	M	T	G	A	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A	V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L	D	Y
Template Known Secondary structure																	T								T	T					S	S						T			S	S			S	S	S					T	T									T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.																														.	.	.	.								.	.																.	.	.	.	.
Query SS confidence		.																														.	.	.	.								.	.																.	.	.	.	.
Query Sequence		.	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	.	.	.	.	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	.	.	.	.	.	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q
Query Conservation		.																														.	.	.	.								.	.																.	.	.	.	.
Alig confidence		.																														.	.	.	.								.	.																.	.	.	.	.
Template Conservation
Template Sequence		A	F	D	L	I	D	R	Q	S	S	G	N	L	A	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E	L	P	D	G	Y	M	A	A	L	K	R	K	C	E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	T	M	F	A	C	Q	R	D	G	V	T	P	D	I	L	T	L	S
Template Known Secondary structure												S									S			T	T	T	T						T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		198		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		K	.	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L
Query Conservation			.
Alig confidence			.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	L	G	A	G	L	P	L	A	A	I	V	T	S	A	A	I	E	E	R	A	H	E	L	G	Y	L	F	Y	.	.	.	.	.	.	.	.	.	.	T	T	H	V	S	D	P	L	P	A	A	V	G	L	R	V	L	D	V	V	Q	R	D	G	L	V	A	R	A	N	V	M	G	D	R	L	R	R	G	L
Template Known Secondary structure						T	T	S	S																	T	T					.	.	.	.	.	.	.	.	.	.		T	T	T	T																		T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.																													.	.
Query SS confidence																														.	.	.	.	.	.	.	.																													.	.
Query Sequence		Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	.	.	.	.	.	.	.	.	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	.	.	G	M	R	A	S	I	Y	N	A	M	P	L	E	G
Query Conservation																														.	.	.	.	.	.	.	.																													.	.
Alig confidence																	.	.	.	.										.	.	.	.	.	.	.	.																													.	.
Template Conservation																	.	.	.	.
Template Sequence		L	D	L	M	E	R	F	D	C	I	G	D	V	R	G	.	.	.	.	R	G	L	L	L	G	V	E	I	V	K	D	R	R	T	K	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	G	M	G	G	V	F	R	I	A	P	P	L	T	V	S	E	D	E
Template Known Secondary structure									T	T							.	.	.	.		T	T										T	T	T	T				T	T												T	T									T	T	S										T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	L	G	L	S	L	L	G	Q	A	I	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions