Return to main results Retrieve Phyre Job Id

Job DescriptionP23721
Confidence99.92%DateThu Jan 5 11:39:37 GMT 2012
Rank97Aligned Residues314
% Identity9%Templated1cl1a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  PAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGD
Query Conservation 
   
  
 

    
              

           
  

   
      

  




 
           
Alig confidence 






























......

















....




















Template Conservation    
                      
 
   ......

   

  

 
 
   ....     

  
    
 

   
Template Sequence  ASSLVFDSVEAKKHATRNRANGELFYGRRGT. . . . . . LTHFSLQQAMCELEGGAG. . . . CVLFPCGAAAVANSILAFIEQ
Template Known Secondary structure 
S



SSTTTTT



TTT

......T
S....SS

T
Template Predicted Secondary structure 




















......


....



Template SS confidence 















































































   31........40.........50.........60. ........70......... 80.........90.........100
 
   91........100..... ....110.........120.........130.........140.........150.........160......
Predicted Secondary structure 




..




























..
Query SS confidence 














. .




























































. .
Query Sequence  KTTADYVDAGYWAAS. . AIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFG. .
Query Conservation 

 
           ..        
                               
      

       
    ..
Alig confidence 














..

















.....





































..
Template Conservation 

 

                    

     
  .....
   
       
 

      
  
   

  
   
  
Template Sequence  GDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL. . . . . IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRS
Template Known Secondary structure  T
TTS
TGGGGT

TT.....
GGGGGGT

TTSS
TTT




Template Predicted Secondary structure 












.....





















Template SS confidence 















































































   101........110.........120.........130..... ....140.........150.........160.........170.....
 
   167..170.........180....... ..190.........200..... ....210.........220.........230.........240.
Predicted Secondary structure  ..















.











..






















Query SS confidence  . .




















.

















. .



































Query Sequence  . . ADVVVAADFSSTILSRPIDVS. RYGVIYAGAQKNIGPAGL. . TIVIVREDLLGKANIACPSILDYSILNDNGSMFNTP
Query Conservation  ..      

 
   
       .  
    
  
  

 
 ..
 
                               
 
Alig confidence  ..




















.

















..




















............


Template Conservation     
  



 
 
 
        
 
    
  
  
  
   
 
         
       
............   
Template Sequence  VVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATYLVGHSDAMIGTAVCNARCWEQLRENAYLMG. . . . . . . . . . . . QMV
Template Known Secondary structure 
TT

TTTTTTSS
GGGGT
S



S
SSS



TTTTT............


Template Predicted Secondary structure 

































............


Template SS confidence 















































































   176...180.........190.........200.........210.........220.........230.........240 ...
 
   242.......250.........260.........270.........280.........290....... ..300.......
Predicted Secondary structure 












..............



Query SS confidence 























































. . . . . . . . . . . . . .









Query Sequence  PTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSR. . . . . . . . . . . . . . MNVPFQLADS
Query Conservation      
  
  

       
          
   
   
               
 ..............  
 
     
Alig confidence 












......




































..............









Template Conservation      
      
 ......    
       
  

  
        
    
       
               
   
Template Sequence  DADTAYITSRGLR. . . . . . TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKK
Template Known Secondary structure 
T......TT
TT
TTSTTSTT
S


SSS
Template Predicted Secondary structure 




......



















Template SS confidence 















































































   245....250....... ..260.........270.........280.........290.........300.........310........
 
   308.310.........320......... 330.........340.........350.......
Predicted Secondary structure 









..........................








Query SS confidence 





















. . . . . . . . . . . . . . . . . . . . . . . . . .



























Query Sequence  ALDKLFLEESFAAGLHALKGHR. . . . . . . . . . . . . . . . . . . . . . . . . . VVGGMRASIYNAMPLEGVKALTDFMVEF
Query Conservation           
   

    
  ..........................  
 



     
 


  

  
 
 
Alig confidence 





















..........................



























Template Conservation              
       
 
   

                  
     







   


 

  

  
Template Sequence  LNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI
Template Known Secondary structure 

TT
SS
B

S


SSS

TSTT





S


SS
T
Template Predicted Secondary structure 






























Template SS confidence 











































































   319320.........330.........340.........350.........360.........370.........380.........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions