Job Description P23721 Confidence 99.61% Date Thu Jan 5 11:39:37 GMT 2012 Rank 228 Aligned Residues 319 % Identity 10% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	Y	.	.	.	.	I	I	P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L
Template Known Secondary structure		S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					S	S	S																				.	.	.	.					S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
								88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		.	.	.	.	.	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	.	.	.	.	.	.	.	.	.	.	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	.	.	.	.	A	A	Y	M	H
Query Conservation		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence		.	.	.	.	.	.																	.																						.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																								.
Template Sequence		L	K	Y	K	Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	.	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T
Template Known Secondary structure								T	T			S	S						S	S				.									T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		148	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure								.													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	C	P	N	E	T	.	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P
Query Conservation								.													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.													.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	A	K	D	P	L	L	N
Template Known Secondary structure		S	S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S												S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		203	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		A	G	L	T	I	V	I	V	R	E	D	L	.	.	.	.	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G
Query Conservation														.	.	.	.
Alig confidence				.										.	.	.	.														.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation				.																											.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		I	G	.	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	.	.	.	.	.	.	.	.	.	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	.	.	.	.	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D
Template Known Secondary structure		S		.						S	S																T		S	T	.	.	.	.	.	.	.	.	.	T	T	T	T																T	T			.	.	.	.
Template Predicted Secondary structure				.																											.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		272	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.						.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	.	.	.	.	.	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	V	V	G	G	M	R	A	S	I
Query Conservation																																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	R	E	A	G	I	P	I	Q	Y	P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F	M	R	L	T	I
Template Known Secondary structure						T	T			B		S	S			S	S						S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		339	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Y	N	A	M	.	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		A	R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K	E	K
Template Known Secondary structure			T	T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions