Job Description P23721 Confidence 99.79% Date Thu Jan 5 11:39:37 GMT 2012 Rank 193 Aligned Residues 321 % Identity 13% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	P	A	M	L	.	.	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																											.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		N	R	Y	M	D	L	L	S	A	Y	S	A	V	N	Q	G	H	R	H	P	K	I	I	N	A	L	I	D	Q	A	N	R	V	T	L	T	S	R	A	F	H	S	D	Q	.	.	.	.	.	.	.	.	.	L	G	P	W	Y	E	K	V	A	K	L	T	N	.	.	.	.	K	E	M	V	L	P	M	N	T	G
Template Known Secondary structure							S	S					T		T	T		B	T												T	T	T		S				T	T	S			S	S	.	.	.	.	.	.	.	.	.													T	.	.	.	.		S						S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		R	G	Q	F	A	A	V	P	L	N	I	L	.	.	.	.	.	.	.	.	.	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	.	.	.	.	.	.	.	L	R	A	V	K	P	M	R	E	W	Q	L	S
Query Conservation														.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	A	V	E	T	A	I	K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	I	V	C	E	D	N	F	H	G	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	D	L	E	A	L	K	A	A	I	T	P	N
Template Known Secondary structure																			T	S				T	T								T	T					S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.								.	.																	.	.	.	.	.																		.
Query SS confidence																				.	.	.	.								.	.																	.	.	.	.	.																		.
Query Sequence		D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	.	.	.	.	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	.	N	I	G	P	A	G	L	T	I	V
Query Conservation																				.	.	.	.								.	.																	.	.	.	.	.																		.
Alig confidence																				.	.	.	.								.	.																	.	.	.	.	.																		.
Template Conservation
Template Sequence		T	A	A	F	I	L	E	P	I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	M	Y	I	L	G	A	L	G	G	G	V	F	P	I	S	C	A
Template Known Secondary structure									S	S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S							T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.																							.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.																							.	.
Template Sequence		A	A	N	R	D	I	L	G	V	F	E	P	G	S	H	G	.	.	.	.	.	.	.	.	.	.	.	.	S	T	F	G	G	N	P	L	A	C	A	V	S	I	A	A	L	E	V	L	E	E	E	.	.	.	.	K	L	T	E	R	S	L	Q	L	G	E	K	L	V	G	Q	L	K	E	I	D	N	.	.	P
Template Known Secondary structure									T	T			T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T																		T	.	.	.	.	T																	T	T				.	.	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.																							.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.													.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F
Query Conservation
Alig confidence																			.	.																						.	.
Template Conservation																			.	.																						.	.
Template Sequence		M	I	T	E	V	R	G	K	G	L	F	I	G	I	E	L	N	.	.	E	P	A	R	P	Y	C	E	Q	L	K	A	A	G	L	L	C	K	E	T	H	.	.	E	N	V	I	R	I	A	P	P	L	V	I	S	E	E	D	L	E	W	A	F	Q	K	I	K	A	V
Template Known Secondary structure		T								T	T							S	.	.	S		S											T							T	.	.	T	T								T	T
Template Predicted Secondary structure																			.	.																						.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions