Job Description P23721 Confidence 99.87% Date Thu Jan 5 11:39:37 GMT 2012 Rank 156 Aligned Residues 330 % Identity 11% Template c3rq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase class i and ii from veillonella2 parvula Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																																							.	.	.
Query SS confidence																						.	.	.	.																																							.	.	.
Query Sequence		I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	.	.	.	.	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	.	.	.	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation																						.	.	.	.																																							.	.	.
Alig confidence																						.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	H	D	E	E	G	N	L	V	F	L	K	T	V	K	E	E	Y	L	S	L	S	D	S	E	H	V	G	Y	A	P	I	A	G	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	L	C	A	A	E	K	E	C	F	G	N	F	R	P	E	G	H	I	R	S	I	A	T	A	G	G
Template Known Secondary structure				B		T	T	S		B												T								S				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G			S	S								S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																.	.	.	.	.													.
Query SS confidence																																																.																.	.	.	.	.													.
Query Sequence		R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	.	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	.	.	.	.	.	Q	L	S	D	N	A	A	Y	M	H	Y	C	.
Query Conservation																																																.																.	.	.	.	.													.
Alig confidence																																	.	.														.																.	.	.	.	.													.
Template Conservation																																	.	.
Template Sequence		T	G	G	I	H	H	L	I	H	N	Y	T	E	P	G	D	E	V	L	T	A	D	W	Y	W	G	A	Y	R	V	I	.	.	C	S	D	T	G	R	T	L	V	T	Y	S	L	F	D	E	H	N	N	F	N	H	E	A	F	Q	N	R	V	N	E	L	A	A	K	Q	T	N	V	V	V	I	F	N	T	P	G
Template Known Secondary structure													S		T	T							S	S			T						.	.				T	T								S	B		T	T	S	S	B																	S									S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.												.	.	.	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	G	.	.	.	.	.	.	.	.	.	.	.	A	D	V	V	V	A	A	D	F	S	S	T	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		N	N	P	T	G	Y	S	I	E	D	K	D	W	D	S	I	L	N	F	L	K	D	L	V	A	I	G	R	N	N	V	I	I	G	I	D	V	A	Y	L	D	Y	S	G	E	K	D	E	V	R	A	F	F	N	K	F	S	H	L	P	K	E	I	L	T	C	V	C	Y	S	L	S	K	G	F	T	X	Y	G	Q
Template Known Secondary structure			T	T	T																						T	S	S										T	T	G	G	G	S	S							G	G	G	G	G	G	T	T			T	T									S	T	T	T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
			205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S
Query Conservation		.
Alig confidence		.																																																								.
Template Conservation																																																										.
Template Sequence		R	V	G	A	X	I	G	I	S	D	D	E	E	I	A	D	E	F	F	E	V	N	K	S	T	S	R	A	T	W	S	N	I	C	R	P	A	X	R	T	X	A	N	I	V	A	D	P	A	K	F	K	E	Y	E	A	.	E	R	N	C	Y	Y	Q	L	I	R	D	R	A	D	I	F	K	Q	E	A	A	Q	V
Template Known Secondary structure											S	S																			T	S	S														T											.
Template Predicted Secondary structure																																																										.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R	H	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.																											.	.	.												.
Template Conservation													.	.	.	.	.	.	.																											.	.	.												.
Template Sequence		G	L	P	X	L	P	Y	R	G	G	F	.	.	.	.	.	.	.	F	I	T	I	P	T	D	S	A	N	A	I	C	E	E	L	K	K	E	H	I	Y	V	I	A	L	.	.	.	A	N	G	I	R	I	A	A	C	G	I	.	P	K	C	Q	X	T	G	L	A	E	K	I	Y	N	A	X	K	S	L	G
Template Known Secondary structure		T								S	S	S	.	.	.	.	.	.	.							T	T											T	T							.	.	.	S	S						G	G	G	S	.						T	T												T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.																											.	.	.												.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.								.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.				.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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