Phyre 2 alignment of P23721 with c3qi6B

Job Description P23721
Confidence 99.88% Date Thu Jan 5 11:39:37 GMT 2012

Rank 148 Aligned Residues 281

% Identity 11% Template c3qi6B_

PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99

Resolution 1.91 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R
Query Conservation
Alig confidence																	.	.	.	.																																																									.	.	.
Template Conservation																	.	.	.	.																																																									.	.	.
Template Sequence	R	T	A	L	E	A	A	L	A	A	V	E	D	A	A	F	.	.	.	.	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W	N	V	E	Y	T	P	V	A	L	A	.	.	.	D
Template Known Secondary structure												T	T		S		.	.	.	.					S	S															T	T							T	T												T	G	G	G	G	T								T	T	.	.	.
Template Predicted Secondary structure																	.	.	.	.																																																									.	.	.
Template SS confidence
	64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.

	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																					.	.																							.																			.
Query SS confidence																																					.	.																							.																			.
Query Sequence	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	S	.	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	.
Query Conservation																																					.	.																							.																			.
Alig confidence																																					.	.																							.																			.
Template Conservation
Template Sequence	L	D	A	V	R	A	A	I	R	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F	A	S	P	A	L	Q	Q	P	L	S	L	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V
Template Known Secondary structure										T	T								S	S		T	T	T																T	T								T	T	T		T	T	T			G	G	G	G	T		S										S		S	S
Template Predicted Secondary structure
Template SS confidence
	137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D
Query Conservation	.
Alig confidence	.																					.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	.	.	.	.	.	.	.	.	.	.	.	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	.	.	.	.	.	.	T	L	V	L	R	M	Q	R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P
Template Known Secondary structure							S															.	.	.	.	.	.	.	.	.	.	.																		T	.	.	.	.	.	.	T																					T		T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
	218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

	285	.	.	.	.	290	.	.	.	.	.	.															.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																		.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	F	Y	R	N	D	V	A	K	A	N	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	N	V	P	F	Q	L	A	.	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D
Template Known Secondary structure	T							T	T	S	T	T	S	T	T									S	S			S							T	T													S	S	S				S					S	S						T	T	T					S					T	T
Template Predicted Secondary structure
Template SS confidence
	281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

	333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	V	R	L	S	V	G	I	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
	366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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