Job Description P23721 Confidence 99.92% Date Thu Jan 5 11:39:37 GMT 2012 Rank 105 Aligned Residues 287 % Identity 13% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		51	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																																			.	.
Query SS confidence													.																																																																			.	.
Query Sequence		E	E	A	E	K	D	F	R	D	L	L	.	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	.	.
Query Conservation													.																																																																			.	.
Alig confidence													.							.	.																																							.	.																			.	.
Template Conservation																				.	.																																							.	.
Template Sequence		P	A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	.	.	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	.	.	P	K	S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W	L
Template Known Secondary structure										T	T	S	S	S			G	G	G	.	.					S																T	T								S	S		T						.	.				T	T										G	G	G	T	T
Template Predicted Secondary structure																				.	.																																							.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.																			.	.	.	.	.
Query SS confidence																																								.	.	.	.	.																			.	.	.	.	.
Query Sequence		L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	.	.	.	.	.	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q
Query Conservation																																								.	.	.	.	.																			.	.	.	.	.
Alig confidence																																								.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D	V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S
Template Known Secondary structure													T	T								S	S		T	T	T																		T	T	T									S				S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		198	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		K	N	I	.	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L
Query Conservation					.
Alig confidence					.																									.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		T	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	H	Q	V	T	D	I	L	R	D	Y	R	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	T	X	I	C	A	G	V	F	D	D	L	V	A	Q	L	A	L	A	H	Y	Q	E	I	.	.	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L
Template Known Secondary structure				S		G	G	G																T	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S																T					.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.													250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																										.																.	.
Query SS confidence																																										.																.	.
Query Sequence		Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	.	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F
Query Conservation																																										.																.	.
Alig confidence																	.	.	.																							.																.	.									.	.
Template Conservation																	.	.	.																																																	.	.
Template Sequence		D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	.	.	.	A	V	V	S	T	S	F	V	K	I	A	V	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N	R	F	E	R	D	G	Y	V	R	L	G	F	A	.	.	C	E	Q	E	T	L	I	K	G	L	E	K
Template Known Secondary structure									T	T							.	.	.	S	S	S	S									S	S																				G	G	G	G	T		T	T								.	.	S
Template Predicted Secondary structure																	.	.	.																																																	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.
		354	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	E	F	E	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	Q	F	L	R	R
Template Known Secondary structure							G	G
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions