Return to main results Retrieve Phyre Job Id

Job DescriptionP23721
Confidence100.00%DateThu Jan 5 11:39:37 GMT 2012
Rank8Aligned Residues346
% Identity10%Templatec3nnkC_
PDB info PDB header:transferaseChain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  AQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFA
Query Conservation       
  

   
  
 

    
              

           
  

   
      

  




 
  
Alig confidence 
























............



























.













Template Conservation      
  


  
   
  
     ............                  

   
    .  

 
 
 
 
  
Template Sequence  PSRLLMGPGPINADPRVLRAMSSQL. . . . . . . . . . . . IGQYDPAMTHYMNEVMALYRGVFRTENR. WTMLVDGTSRAGIE
Template Known Secondary structure 


SSS




TS

............

TT
T


S.SS
Template Predicted Secondary structure 














............









.


Template SS confidence 















































































   12.......20.........30...... ...40.........50.........60.... .....70........
 
   82.......90.........100.........110.........120.........130........ .140.........150.........160
Predicted Secondary structure 




















.














Query SS confidence 
























































.





















Query Sequence  AVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQ. LSDNAAYMHYCPNETIDGIAID
Query Conservation           

 
                   
                        .       
      

      
Alig confidence 
























































.





















Template Conservation   
       

 


                                
   
  

       
         
      
Template Sequence  AILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLA
Template Known Secondary structure 

T
STT

TT





SSTTTT


T
Template Predicted Secondary structure 
































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   161.... ....170.........180......... 190.........200.........210.........220........
Predicted Secondary structure  ..


















..






















........
Query SS confidence 




. .























. .






































. . . . . . . .
Query Sequence  ETPDF. . GADVVVAADFSSTILSRPIDVSRY. . GVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDY. . . . . . . .
Query Conservation   
   ..       

 
   
         ..
    
  
  

 
 
 
                    ........
Alig confidence 




..























..






































........
Template Conservation   
          
 

     
    
      
    
 
   

 
 
 
                            
Template Sequence  ELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDG
Template Known Secondary structure  TTT

TTTBTTB


TTTTT
S








SS

TT



TTS

TT



Template Predicted Secondary structure 






































Template SS confidence 















































































   159160.........170.........180.........190.........200.........210.........220.........230........
 
   229230.........240.........250.........260.........270.........280.........290..
Predicted Secondary structure  ................

















Query SS confidence  . . . . . . . . . . . . . . . .































































Query Sequence  . . . . . . . . . . . . . . . . SILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAK
Query Conservation  ................           
     
  
  

       
          
   
   
            
Alig confidence  ................






























.
























.





Template Conservation             
               
       

  

      .               
   
   
 .      
Template Sequence  DEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQE. GLDYGIARHKLHGDALVKGIQAMGL. ETFGDL
Template Known Secondary structure  SS


S
STT
STT


SS


.
TT
.
B
S
G
Template Predicted Secondary structure 
















.




.


Template SS confidence 















































































   240.........250.........260.........270.........280...... ...290.........300.........310. ......
 
   293......300.........310....... ..320.........330. ...... ..340.........350.........360..
Predicted Secondary structure 










.









..
.







Query SS confidence 
























.













. .





.
























Query Sequence  ANRSRMNVPFQLADSALDKLFLEES. FAAGLHALKGHRVV. . GGMRAS. IYNAMPLEGVKALTDFMVEFERRHG
Query Conservation     
   
 
              
.   

    
    ..
 



.     
 


  

  
 
      
Alig confidence 
























.













..





.
























Template Conservation             

 
         
 
  

 
  
         

   
     
 
   
  
   
  
 
Template Sequence  KHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK
Template Known Secondary structure  GGB
TT

SSS

B


GGGTTT

GGG
STT
Template Predicted Secondary structure 




























Template SS confidence 









































































   318.320.........330.........340.........350.........360.........370.........380.........390.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions