Job Description P23721 Confidence 99.53% Date Thu Jan 5 11:39:37 GMT 2012 Rank 231 Aligned Residues 337 % Identity 10% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	P	A	M	L	.	.	.	.	.	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																								.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		K	R	Y	L	D	G	X	S	G	L	W	C	V	N	S	G	Y	G	R	K	E	L	A	E	A	A	Y	K	Q	L	Q	T	L	S	Y	F	P	X	S	Q	S	.	.	.	.	.	.	.	.	.	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	G	.	.	.	G	E	Y	V	I	F	F	S	N	S	G
Template Known Secondary structure							T	T					T		T	T		B														T	T		S				T	T	S		.	.	.	.	.	.	.	.	.																T	.	.	.	S								S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.
		77	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.													.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Query Sequence		R	G	Q	F	A	A	V	P	.	.	.	.	.	.	.	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	.	.	.	.	.	.	.	.	.	.	.	.	N	V	F	D	A	K	V	T	V	D	G	L	R	.	.	.	.	.	.	.	.
Query Conservation										.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	A	N	E	T	A	F	K	I	A	R	Q	Y	Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q	Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y
Template Known Secondary structure																		T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T	T					S										T	T	T	S	T	T	T	T	T	S		G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
										130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	.	.	.	.	.	.	T	P	D	F	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	R	P	I	D	V	S	R	Y	G
Query Conservation		.	.	.	.	.	.	.	.																																	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		D	V	E	C	V	K	E	V	D	R	V	X	T	W	E	L	S	E	T	I	A	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C	Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	A	F	G	F	X	N	Y	D	V	K
Template Known Secondary structure		G																G	G	G								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I
Query Conservation																.	.
Alig confidence																.	.																						.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		P	D	I	I	T	X	A	K	G	I	T	S	A	Y	L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	E	Y	E	.	.	.	.	.	.	F	F	R	H	I	N	T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	I	I	E	N	E	N	L	I	E	R	S	A	Q	X
Template Known Secondary structure			S						G	G	G	G	T	T	S	S													G	G	G		S	S	S	T	T		.	.	.	.	.	.	S						S	S	S	S																		T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310							.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.										.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	.	.	.	.	.	.	.	.	.	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	.	.	.	.	R	V	V	G	G	M	R
Query Conservation																																						.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence																									.	.	.	.										.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		G	S	L	L	L	E	Q	L	K	E	E	I	G	E	H	P	L	V	G	D	I	R	G	.	.	.	.	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	G	L	I	I	G	R	N	G	X	T	T	A	G	Y	N	N	I	L	T
Template Known Secondary structure														T	T	S	T	T							.	.	.	.	S	S	S										T	T	T	T																		T	T							T	T	S	S	T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370					.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	P	L	V	I	S	S	E	E	I	A	F	V	I	G	T	L	K	T	A	X	E	R
Template Known Secondary structure						T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions