Job Description P23721 Confidence 99.93% Date Thu Jan 5 11:39:37 GMT 2012 Rank 84 Aligned Residues 328 % Identity 12% Template c3n0lA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 campylobacter jejuni Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		E	G	L	E	X	I	A	S	E	N	F	T	L	P	E	V	X	E	V	X	G	S	I	L	T	N	K	Y	A	E	G	Y	P	G	K	R	Y	Y	G	G	C	E	F	V	D	E	I	E	T	L	A	I	E	R	C	K	K	L	F	N	C	.	.	.	K	F	A	N	V	Q	P	N	S	G	S	Q	A	N	Q	G
Template Known Secondary structure			S					T	T													T	S	G	G	G	G							T	T			S	S	S																					T		.	.	.	S							S	S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		V	Y	A	A	L	I	N	P	G	D	K	I	L	G	X	D	L	K	X	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	F	Y	G	V	E	L	D	G	R	I	D	Y	E	K	V	R	E	I	A	K	K	E	K	.	P	K	L	I	V	C	G	A	S	A	Y	A	R	V	I	D	F	A	K	F
Template Known Secondary structure							S		T	T											S		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S															.		S							S	S			S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120														.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		163	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure							.	.															.	.	.	.	.
Query SS confidence							.	.															.	.	.	.	.
Query Sequence		P	D	F	G	A	.	.	D	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G
Query Conservation							.	.															.	.	.	.	.
Alig confidence							.	.															.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	E	I	A	D	E	I	G	A	Y	L	F	A	D	I	A	H	I	A	G	L	V	V	A	G	E	H	P	S	P	F	P	Y	A	H	V	V	S	S	T	T	H	K	T	L	R	G	P	R	G	G	I	I	X	T	N	D	E	E	L	A	K	K	I	N	S	A	I	F	P	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T								T	T	T						T	T	S	S				T	T	T		S						S	S	T	T	T		S		S							S													T	T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E
Query Conservation
Alig confidence		.																								.																																		.	.
Template Conservation		.																								.																																		.	.
Template Sequence		.	I	Q	G	G	P	L	X	H	V	I	A	A	K	A	V	G	F	K	F	N	L	S	D	.	E	W	K	V	Y	A	K	Q	V	R	T	N	A	Q	V	L	A	N	V	L	X	D	R	K	F	K	L	V	S	D	G	T	D	.	.	N	H	L	V	L	X	S	F	L	D	R	E	F	S	G	K	D	A	D	L
Template Known Secondary structure		.	T		S	S																	T	S		.																							T	T				G	G	G	S		S	.	.	S	S							T	T	S	S	S
Template Predicted Secondary structure		.																								.																																		.	.
Template SS confidence
			253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.									.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure											.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		E	S	F	A	A	G	L	H	A	.	.	.	.	.	.	.	.	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	.	.	.	.	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation											.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		A	L	G	N	A	G	I	T	A	N	K	N	T	V	P	G	E	I	R	S	P	F	I	T	S	G	L	R	L	G	T	P	A	L	T	A	R	G	F	K	E	K	E	X	E	I	V	S	N	Y	I	A	D	I	L	D	D
Template Known Secondary structure						T	T									T	T			S		T	T	T		S												T	T																			T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions