Job Description P23721 Confidence 99.97% Date Thu Jan 5 11:39:37 GMT 2012 Rank 41 Aligned Residues 342 % Identity 11% Template c3mc6C_ PDB info PDB header:lyase Chain: C: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of scdpl1 Resolution 3.15 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L
Query Conservation
Alig confidence																																					.	.	.
Template Conservation																																					.	.	.
Template Sequence		K	V	S	G	A	V	Y	H	G	G	D	D	L	I	H	L	Q	T	I	A	Y	E	K	Y	C	V	A	N	Q	L	H	P	D	V	F	.	.	.	P	A	V	R	K	M	E	S	E	V	V	S	M	V	L	R	M	F	N	A	P	S	D	T	G	C	G	T	T	T	S	G	G	T	E	S	L	L	L	A	C	L
Template Known Secondary structure			B	S	S	S		S																	T	S	S		B	T	T		T	T	T		.	.	.																		T	T			T	T	T							S	S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		86	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																																						.
Query SS confidence						.	.	.	.	.	.	.	.																																						.
Query Sequence		N	I	L	G	.	.	.	.	.	.	.	.	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	.	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G
Query Conservation						.	.	.	.	.	.	.	.																																						.
Alig confidence						.	.	.	.	.	.	.	.															.	.																						.
Template Conservation																												.	.
Template Sequence		S	A	K	M	Y	A	L	H	H	R	G	I	T	E	P	E	I	I	A	P	V	T	A	H	A	G	.	.	F	D	K	A	A	Y	Y	F	G	M	K	L	R	H	V	E	L	D	P	T	T	Y	Q	V	D	L	G	K	V	K	K	F	I	N	K	N	T	V	L	L	V	G	S	A	P	N	F	P	H	G	I	A
Template Known Secondary structure											S			S	S							T	T	S				.	.								S									B		T	T	T		S	B		T	T	T	T	G	G	G			S	S								T	T		T	T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		157	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.															.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence											.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		I	A	I	D	E	T	P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	.	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N
Query Conservation											.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence											.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		D	D	I	E	G	L	G	K	I	A	Q	K	Y	K	L	P	L	H	V	D	S	C	L	G	S	F	I	V	S	F	M	E	K	A	G	Y	K	N	L	P	L	L	D	F	R	V	P	G	V	T	S	I	S	C	D	T	H	K	Y	G	F	A	P	K	G	S	S	V	I	M	Y	R	N	S	D	L	R	M	H	Q
Template Known Secondary structure			S		T	T	T	T	T					T	T							T	T	T	T					G	G	G	T	T	T	T			S					S	T	T	S	T	T								T	T	T	T	T				S	S							S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	.	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M
Query Conservation																																																																	.
Alig confidence								.																																		.																							.											.	.	.
Template Conservation								.																																		.																																		.	.	.
Template Sequence		Y	Y	V	N	P	A	.	W	T	G	G	L	Y	G	S	P	T	L	A	G	S	R	P	G	A	I	V	V	G	C	W	A	T	M	V	N	M	G	E	N	.	G	Y	I	E	S	C	Q	E	I	V	G	A	A	M	K	F	K	K	Y	I	Q	E	N	I	P	D	L	D	I	M	G	N	P	.	.	.	R	Y	S
Template Known Secondary structure		S			B	T	T	.		T	T	S		B			S	S	S		S	S		B																		.																							S		T	T					S			.	.	.		S	S
Template Predicted Secondary structure								.																																		.																																		.	.	.
Template SS confidence
		403	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.				.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation
Alig confidence												.																		.																	.
Template Conservation												.																		.																	.
Template Sequence		V	I	S	F	S	S	K	T	L	N	.	I	H	E	L	S	D	R	L	S	K	K	G	W	H	F	N	A	.	L	Q	K	P	V	A	L	H	M	A	F	T	R	L	S	A	.	H	V	V	D	E	I	C	D	I	L	R	T	T	V	Q	E
Template Known Secondary structure								T	T	T	T	.										T	T	T		B				.			S	S									T	T	T	T	.		T
Template Predicted Secondary structure												.																		.																	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.		.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions