Return to main results Retrieve Phyre Job Id

Job DescriptionP23721
Confidence22.45%DateThu Jan 5 11:39:37 GMT 2012
Rank268Aligned Residues98
% Identity13%Templatec3l2eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycocyamine kinase beta chain; PDBTitle: glycocyamine kinase, alpha-beta heterodimer from marine worm2 namalycastis sp.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   262.......270.........280..... ....290.........300.........310.........320.........330
Predicted Secondary structure 


...........























Query SS confidence 























. . . . . . . . . . .












































Query Sequence  VAEMDKINQQKAELLYGVIDNSDF. . . . . . . . . . . YRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRV
Query Conservation            
   
   
     ...........          
   
 
              
   

    
   
Alig confidence 























...........







































.



Template Conservation 
   
 
       

  
      



  


















 
 

 
        
   


 

.
  
Template Sequence  LKAVFSRFARGLLEVERLMKECGHGLMHNDRLGYICTCPTNMGTVVRASVHLRLAFLEKHPRFDEMLGKLRLGKR. GLAT
Template Known Secondary structure  TTT

B
TTT

SSTTS
BT

TTTTT
TTTT.


T
Template Predicted Secondary structure 



























.
Template SS confidence 















































































   257..260.........270.........280.........290.........300.........310.........320.........330. ....
 
   331....... .340.........350.........360
Predicted Secondary structure 


...




Query SS confidence 







. . .





















Query Sequence  VGGMRASI. . . YNAMPLEGVKALTDFMVEFERR
Query Conservation   
 



 ...    
 


  

  
 
    
Alig confidence 







...





















Template Conservation 
    


  


 

 


  
   
  

  
Template Sequence  DSTYDISNWARLGKSERELVQVLVDGVNLLIAC
Template Known Secondary structure  T



SSS
Template Predicted Secondary structure 






Template SS confidence 
































   342.......350.........360.........370....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions