Job Description P23721 Confidence 100.00% Date Thu Jan 5 11:39:37 GMT 2012 Rank 33 Aligned Residues 323 % Identity 11% Template c3ke3A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative serine-pyruvate aminotransferase; PDBTitle: crystal structure of putative serine-pyruvate aminotransferase2 (yp_263484.1) from psychrobacter arcticum 273-4 at 2.20 a resolution Resolution 2.20 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E
Query Conservation
Alig confidence																																							.	.	.																		.
Template Conservation																																							.	.	.																		.
Template Sequence		Y	S	V	V	Y	T	D	R	A	L	N	H	X	S	K	A	F	Q	E	V	X	N	D	L	L	S	N	L	K	T	V	Y	N	A	E	A	A	.	.	.	V	I	I	P	G	S	G	T	Y	G	X	E	A	V	A	R	Q	.	L	T	I	D	E	D	C	L	I	I	R	N	G	W	F	S	Y	R	W	T	Q	I
Template Known Secondary structure				S	S			T	T	S			T	T	S																			T		S			.	.	.					S													.			T	T									S
Template Predicted Secondary structure																																							.	.	.																		.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence		A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	G	K	F	A	K	S	S	T	V	L	T	A	E	R	T	E	D	T	E	A	P	K	P	F	A	P	V	D	I	E	T	A	V	A	K	I	K	E	D	K	S	A	I	V	Y	A	P	H	V	E	T	S	S	G	I	I	L	S	E	E	Y	I	K	A	L	S	E	A	V	H	S	V	G	G	L	L	V
Template Known Secondary structure								S	S										S	S			S	S																				T		S						S			T	T	T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		173	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure											.																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	F	S	S	T	I	L	S	.	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	.	.	.	.	.	.	.	.	.	.	S	I	L	N	D	N	G	S	M	F	N	T	P
Query Conservation											.																																																.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	C	I	A	S	G	C	V	W	L	D	X	K	E	L	G	I	D	V	L	I	S	A	P	Q	G	W	S	S	T	P	C	A	G	L	V	X	L	S	A	A	A	I	K	K	V	E	S	T	E	S	N	C	F	S	L	D	L	K	Q	W	L	T	I	X	R	A	Y	E	N	G	G	H	A	Y	H	A	T	X
Template Known Secondary structure					T	T		T	T									T		S											S																			T				S		S	T	T														T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G
Query Conservation
Alig confidence																				.																										.																				.	.
Template Conservation																				.																										.																				.	.
Template Sequence		P	T	D	S	L	R	Q	F	R	D	A	I	L	E	A	K	E	I	.	G	F	D	I	L	R	D	A	Q	W	E	L	G	N	R	V	R	K	V	L	T	D	K	G	I	.	E	S	V	A	A	E	G	F	E	A	P	G	V	V	V	S	Y	T	E	.	.	R	D	D	X	H	K	G	S	A	F	A	E	A	G
Template Known Secondary structure																				.																							T	T		.		B	S	B		T	T		B		S	S							S	.	.						S	S						T	T
Template Predicted Secondary structure																				.																										.																				.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		L	H	A	L	K	G	H	R	V	V	.	.	.	.	.	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	I	A	A	G	V	P	L	K	V	G	E	P	D	N	F	K	T	F	R	L	G	L	F	G	L	D	K	L	T	D	I	D	G	T	V	E	R	F	E	K	A	L	D	E
Template Known Secondary structure											S	S				T	T										S					T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions