Job Description P23721 Confidence 99.93% Date Thu Jan 5 11:39:37 GMT 2012 Rank 89 Aligned Residues 331 % Identity 9% Template c3kaxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q
Query Conservation											.	.
Alig confidence											.	.																			.	.	.	.										.	.	.	.	.
Template Conservation																															.	.	.	.										.	.	.	.	.
Template Sequence		E	E	L	I	H	A	W	I	A	D	X	D	F	E	V	P	Q	P	I	Q	T	A	L	K	K	R	I	E	H	.	.	.	.	P	I	F	G	Y	T	L	P	P	.	.	.	.	.	E	N	I	G	D	I	I	C	N	W	T	K	K	Q	Y	N	W	D	I	Q	K	E	W	I	V	F	S	A	G	I	V	P	A
Template Known Secondary structure		S								S	S		S	S															T	S	.	.	.	.										.	.	.	.	.	T	T																			G	G	G					S
Template Predicted Secondary structure																															.	.	.	.										.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	.	.	.	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G
Query Conservation																																																		.	.	.
Alig confidence																										.	.																							.	.	.
Template Conservation																										.	.
Template Sequence		L	S	T	S	I	Q	A	F	T	K	E	N	E	S	V	L	V	Q	P	P	I	Y	P	P	.	.	F	F	E	X	V	T	T	N	N	R	Q	L	C	V	S	P	L	Q	K	Q	N	D	T	Y	A	I	D	F	E	H	L	E	K	Q	F	Q	Q	G	V	K	L	X	L	L	C	S	P	H	N	P	I	G	R	V
Template Known Secondary structure												T	T							S	S					.	.								T	T									B		S	S	S	S		B												T	T								S	S	B	T	T	T	T	B
Template Predicted Secondary structure																										.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		157	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		I	A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	.	.	.	.	.	.	.	.	.	.	.	I	L	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K	A
Query Conservation											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence											.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		W	K	K	E	E	L	T	K	L	G	S	L	C	T	K	Y	N	V	I	V	V	A	D	E	I	H	S	D	I	I	Y	A	D	H	T	H	T	P	F	A	S	L	S	E	E	L	A	A	R	T	I	T	C	X	A	P	S	K	T	F	N	I	A	G	L	Q	A	S	I	I	I	I	P	N	E	K	L	R	Q	A
Template Known Secondary structure																	T	T								T	T	T	T		B		T	T						G	G	G	S						T	T							S	S	T	G	G	G		G	G	G
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		F	T	S	I	Q	Y	R	Q	.	.	.	.	.	.	.	.	.	.	G	F	H	G	L	N	I	F	A	Y	T	A	X	Q	S	A	Y	T	E	C	N	D	W	.	.	L	N	E	I	R	F	Y	I	E	D	N	A	K	F	A	C	E	Y	I	K	D	H	I	P	T	L	S	V	X	K	P	E	G	S	F	L	L
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	T																T	T	S					.	.																								T	T							S	B	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		253	.	.	.	.	.	.	260											.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		N	V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.										.	.
Template Conservation																																															.	.
Template Sequence		W	I	D	C	S	A	L	N	L	S	Q	D	E	R	T	K	L	L	E	E	K	G	K	I	I	V	E	P	G	E	K	Y	G	L	G	G	E	E	H	I	G	I	N	I	G	.	.	C	P	R	S	V	L	E	E	I	L	N	R	L	R	H	T
Template Known Secondary structure						G	G	G															S							S	G	G	G		T	T	T	T	T							S	.	.	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions