Job Description P23721 Confidence 99.49% Date Thu Jan 5 11:39:37 GMT 2012 Rank 234 Aligned Residues 280 % Identity 14% Template c3hvyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure											.																																																		.	.
Query SS confidence											.																																																		.	.
Query Sequence		A	E	V	L	K	Q	A	Q	Q	.	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	.	.	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T
Query Conservation											.																																																		.	.
Alig confidence											.																	.	.	.	.	.	.																					.	.	.					.	.
Template Conservation																												.	.	.	.	.	.																					.	.	.
Template Sequence		L	K	V	L	K	A	F	Q	E	E	R	I	S	E	S	H	F	T	N	S	S	G	Y	G	Y	N	.	.	.	.	.	.	D	I	G	R	D	S	L	D	R	V	Y	A	N	I	F	N	T	E	S	A	.	.	.	F	V	R	P	H	F	V	N	G	T	H	A	I	G	A	A	L	F	G	N	L	R	P	N	D
Template Known Secondary structure											T	T			G	G	G	S					T	T		T	T	.	.	.	.	.	.																T		S			.	.	.				T	T		S	S												T			T	T
Template Predicted Secondary structure																												.	.	.	.	.	.																					.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence		T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	.	.	.	.	.	.	.	.	.	.	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	.	.	.	.	.	.	P	N	E	T	I	D	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																.																										.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		T	X	X	S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K	K	V	G	S	L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	.	D	G	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	S	I	K	L	I	H	I	Q	R	S	T	G	Y	G	W	R	K	S	L	R	I
Template Known Secondary structure						S	S	S	S			G	G	G					T			T	T			S			T	G	G	G	T									B	.	T	T	B														T	T								S	S			S	S	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.			.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.
Predicted Secondary structure													.	.		.	.																			.	.																	.	.	.																	.	.
Query SS confidence													.	.		.	.																			.	.																	.	.	.																	.	.
Query Sequence		I	A	I	D	E	T	P	D	F	G	A	.	.	D	.	.	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	.	.	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	.	.	.	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	.	.	N	I	A	C	P	S	I
Query Conservation													.	.		.	.																			.	.																	.	.	.																	.	.
Alig confidence													.	.		.	.																			.	.																	.	.	.																	.	.
Template Conservation
Template Sequence		A	E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C	Y	G	E	F	V	E	E	K	E	P	T	D	V	G	A	D	I	I	A	G	S	L	I	K	N	I	G	G	G	I	A	T	T	G	G	Y	I	A	G	K	E	E	Y	V	T	Q	A	T	F	R	V	T	V	P	G	I
Template Known Secondary structure																S	S	S							T	T	T	T	T	T	S	S	S		G	G	G	G	T		S						T	T	S	G	G	G	T	T	T			S																			S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	.	G	E	C	G	S	T	F	G	V	X	R	S	L	Y	E	G	L	F	X	.	.	.	.	.	.	A	P	H	V	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	L	A	G	F	D	V	L	P	K	Y	N	D	K	R	T	D	I	I	Q	A	I	K	F	N
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.	.	G	G					T	T												.	.	.	.	.	.																							T					S		T	T	S			S	S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		276											.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.							.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	K	K	L	I	D	F	I	K	G	I	Q	T	A	S
Template Known Secondary structure		S														T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions