Job Description P23721 Confidence 99.94% Date Thu Jan 5 11:39:37 GMT 2012 Rank 78 Aligned Residues 327 % Identity 11% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D	K	T	T
Query Conservation
Alig confidence																																																				.	.	.
Template Conservation																																																				.	.	.
Template Sequence		V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	.	.	.	E	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A	V	L	H	A	L	M	S	P	G	E	R
Template Known Secondary structure											T	S	G	G	G	G							T	T			S	S	S																					T		.	.	.	S							S	S															T	T
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		94	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.
Predicted Secondary structure												.	.	.																																																																	.	.
Query SS confidence												.	.	.																																																																	.	.
Query Sequence		A	D	Y	V	D	A	G	Y	W	A	.	.	.	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T	P	D	F	G	A	.	.	D
Query Conservation												.	.	.																																																																	.	.
Alig confidence												.	.	.																																																																	.	.
Template Conservation
Template Sequence		L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	A	G	W	S	A	Y	P	R	V	L	D	F	A	A	F	R	S	I	A	D	E	V	G
Template Known Secondary structure							G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S							S	S			S															T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		V	V	V	A	A	D	F	S	S	T	I	L	S	R	.	.	.	.	.	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																							.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	A	D	V	V	S	T	T	V	H	T	L	G	G	G	R	S	.	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	.	.	.	.	.	.	.	.	.	.	.	Q	Q	G	G	P	L	M
Template Known Secondary structure									T	T	T						T	T	S	S			S	T	T	T		S													S		.							G	G	G									T	T	T	.	.	.	.	.	.	.	.	.	.	.	T		S	S
Template Predicted Secondary structure																																											.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.												.	.	.	.	.	.	260
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.																										.
Query SS confidence																																							.	.	.	.	.																										.
Query Sequence		F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	.	.	.	.	.	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	.	D	S	A	L	D	K	L	F	L	E	E	S
Query Conservation																																							.	.	.	.	.																										.
Alig confidence																		.																					.	.	.	.	.															.	.	.									.
Template Conservation																		.																																								.	.	.
Template Sequence		H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	.	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	.	.	.	H	L	V	L	V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L	L
Template Known Secondary structure															T	S		.																					S	S						T	T				G	G	G	S		S	S	.	.	.	S							T	T	S	S
Template Predicted Secondary structure																		.																																								.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		F	A	A	G	L	H	A	L	K	G	.	.	.	.	.	.	.	.	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	.	.	.	.	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R
Query Conservation												.	.	.	.	.	.	.	.																	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A
Template Known Secondary structure				T	T									T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions