Job Description P23721 Confidence 99.92% Date Thu Jan 5 11:39:37 GMT 2012 Rank 93 Aligned Residues 322 % Identity 12% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		A	Q	I	F	N	F	S	S	G	.	.	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q
Query Conservation											.	.
Alig confidence											.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	I	I	H	X	E	V	G	Q	P	G	T	G	A	P	R	G	A	V	E	A	L	A	K	S	L	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G
Template Known Secondary structure										S	S		S	S		S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					G	G	G					S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I
Query Conservation
Alig confidence																														.	.																		.
Template Conservation																														.	.																		.
Template Sequence		F	L	L	A	F	T	A	L	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	.	.	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	.	R	L	Q	P	V	P	A	D	F	A	G	L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	T	X	L	D	H
Template Known Secondary structure												T	T								S									.	.				T	T										G	G	G	.	T	T	S							T	T	S			S						S	S		T	T	T
Template Predicted Secondary structure																														.	.																		.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																		.	.	.	.	.	.																							.	.
Query SS confidence								.	.	.	.	.																		.	.	.	.	.	.																							.	.
Query Sequence		D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	.	.	.	.	.	.	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L
Query Conservation								.	.	.	.	.																		.	.	.	.	.	.																							.	.
Alig confidence								.	.	.	.	.																		.	.	.	.	.	.																							.	.																					.	.
Template Conservation																																																																																.	.
Template Sequence		A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	N	.	.
Template Known Secondary structure														T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T			T	T	S									G	G	G											.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																								.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.																								.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	C	D	A	E	L	.	.	.	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	.	T	R	I	A	P	P	D	G	A	F	Y	V	Y	A	D	V	S	D	L	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T															T	T						.	.	.																						T		.			B					B	T	T							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																								.	.	.																								.
Template SS confidence
												259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R	H
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.										.	.
Template Conservation																																								.	.
Template Sequence		D	D	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	.	.	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q	A	R
Template Known Secondary structure		S																				G	G	G	T		T	T	T	G	G	G								.	.	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions