Phyre 2 alignment of P23721 with c3gwpA

Job Description P23721
Confidence 99.55% Date Thu Jan 5 11:39:37 GMT 2012

Rank 229 Aligned Residues 279

% Identity 14% Template c3gwpA_

PDB info PDB header:lyase Chain: A: PDB Molecule:carbon-sulfur lyase involved in aluminum resistance; PDBTitle: crystal structure of carbon-sulfur lyase involved in aluminum2 resistance (yp_878183.1) from clostridium novyi nt at 2.90 a3 resolution

Resolution 2.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	16	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure											.	.	.																																																.	.
Query SS confidence											.	.	.																																																.	.
Query Sequence	A	E	V	L	K	Q	A	Q	Q	E	.	.	.	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	.	.	H	G	G	G	R	G	Q	F	A	A	V	P	L	N	I	L	G	D
Query Conservation											.	.	.																																																.	.
Alig confidence											.	.	.																		.	.	.	.	.	.	.	.																	.	.	.				.	.
Template Conservation																															.	.	.	.	.	.	.	.																	.	.	.
Template Sequence	L	K	V	L	N	A	F	Q	E	E	R	I	S	E	A	H	F	T	N	S	S	G	Y	G	Y	G	D	I	G	R	.	.	.	.	.	.	.	.	D	S	L	D	A	V	Y	A	R	V	F	N	T	E	S	A	.	.	.	L	V	R	P	H	F	V	N	G	T	H	A	L	G	A	A	L	F	G	N	L	R	P
Template Known Secondary structure										T	T			G	G	G	S					T	T		T	T					.	.	.	.	.	.	.	.											T	T		S			.	.	.			B	T	T			S															T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
	45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.									.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

	91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	.	.	.	.	.	.	.	.	.	.	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	.	.	.	.	.	.	C	P	N	E	T	I
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation
Template Sequence	G	N	T	X	L	S	V	C	G	E	P	Y	D	T	L	H	D	V	I	G	I	T	E	N	S	N	X	G	S	L	K	E	F	G	I	N	Y	K	Q	V	D	L	K	E	D	G	K	P	N	L	E	E	I	E	K	V	L	K	E	D	E	S	I	T	L	V	H	I	Q	R	S	T	G	Y	G	W	R	R	A	L
Template Known Secondary structure	T						S	S	S	S			T	T						T	S	S				T	T			T	G	G	G	T								B		T	T	S	S	B													T	T									S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
	114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

	155	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.
Predicted Secondary structure														.	.	.	.																				.	.																	.	.																				.	.
Query SS confidence														.	.	.	.																				.	.																	.	.																				.	.
Query Sequence	D	G	I	A	I	D	E	T	P	D	F	G	A	.	.	.	.	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	.	.	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	.	.	A	G	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	.	.	C	P	S
Query Conservation														.	.	.	.																				.	.																	.	.																				.	.
Alig confidence														.	.	.	.																				.	.																	.	.																				.	.
Template Conservation
Template Sequence	L	I	E	D	I	K	S	I	V	D	C	V	K	N	I	R	K	D	I	I	C	F	V	D	N	C	Y	G	E	F	X	D	T	K	E	P	T	D	V	G	A	D	L	I	A	G	S	L	I	N	I	G	G	G	I	A	P	T	G	G	Y	L	A	G	T	K	D	C	I	E	K	T	S	Y	R	L	T	V	P	G
Template Known Secondary structure																	T	T	S							T	T		T	T	S	S	S	S		G	G	G	G	T		S									T	T	T	T	T			S																			S		T	T
Template Predicted Secondary structure
Template SS confidence
	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L
Query Conservation
Alig confidence			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence	I	G	.	.	.	.	.	G	E	C	G	S	T	F	G	V	V	R	S	X	Y	Q	G	L	F	L	A	.	.	.	.	.	.	.	.	.	.	.	P	H	I	S	X	E	A	L	K	G	A	I	L	C	S	R	I	X	E	L	A	G	F	E	V	X	P	K	Y	D	E	K	R	S	D	I	I	Q	S	I	K	F
Template Known Secondary structure	T	G	.	.	.	.	.	G	G	S				T	T													.	.	.	.	.	.	.	.	.	.	.																					T	T					S		T	T	S			S	S	S
Template Predicted Secondary structure			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	275	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.												.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence	N	D	K	D	K	L	I	E	F	C	K	G	I	Q	T	G	S
Template Known Secondary structure	S	S														T
Template Predicted Secondary structure
Template SS confidence
	339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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