Job Description P23721 Confidence 99.94% Date Thu Jan 5 11:39:37 GMT 2012 Rank 74 Aligned Residues 308 % Identity 11% Template c3fkdC_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-threonine-o-3-phosphate decarboxylase; PDBTitle: the crystal structure of l-threonine-o-3-phosphate2 decarboxylase from porphyromonas gingivalis Resolution 2.50 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	F	N	F	S	S	G	.	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A
Query Conservation									.
Alig confidence									.																												.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		I	V	N	F	S	T	T	V	W	T	D	G	D	D	H	L	E	K	H	L	V	E	N	L	N	C	I	R	H	Y	P	E	P	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	R	Q	X	L	A	K	R	N	S	V	D	N	N	A	.	.	I	L	V	T	N	G	P	T	A	A	F	Y	Q
Template Known Secondary structure						S			S															T	G	G	G	G	G	S				T	T		.	.	.	.	.	.	.	.	.	.	.	.	.											T	T			G	G	G	.	.					S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	N	I	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T
Query Conservation
Alig confidence							.	.															.	.																						.	.	.	.	.	.	.
Template Conservation							.	.															.	.																						.	.	.	.	.	.	.
Template Sequence		I	A	Q	A	F	.	.	R	G	S	R	S	L	I	A	I	P	S	F	A	E	.	.	Y	E	D	A	C	R	X	Y	E	H	E	V	C	F	Y	P	S	N	E	D	I	.	.	.	.	.	.	.	G	E	A	D	F	S	N	X	D	F	C	W	L	C	N	P	N	N	P	D	G	R	L	L	Q	R	T	E	I
Template Known Secondary structure						T	.	.	T	T								S					.	.								T	T								T	T	S		G	.	.	.	.	.	.	.	G	G	S			T	T		S						S	S		T	T	T
Template Predicted Secondary structure							.	.															.	.																						.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		163	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure					.	.	.														.	.	.	.	.	.	.																											.	.
Query SS confidence					.	.	.														.	.	.	.	.	.	.																											.	.
Query Sequence		P	D	F	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	.	.	.	.	.	.	.	I	L	S	R	P	I	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	.	.	L	T	I	V	I	V	R	E	D	L	L	G	K	A	N	I	A	C	P	S	I	L	D	Y	S	I
Query Conservation					.	.	.														.	.	.	.	.	.	.																											.	.
Alig confidence					.	.	.														.	.	.	.	.	.	.																											.	.																						.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	R	L	L	N	D	H	P	D	T	T	F	V	L	D	Q	S	Y	V	S	F	T	T	E	E	V	I	R	P	A	D	I	K	G	R	K	N	L	V	X	V	Y	S	F	S	H	A	Y	G	I	P	G	L	R	I	G	Y	I	V	A	N	K	D	F	X	K	R	V	A	A	F	S	T	P	W	.	.	.	.	.
Template Known Secondary structure									T	T	S							T	T	G	G	G		S	S					G	G	G	G	T	T		S	S							S	T	T	T	S	S		G	G	G																	T	T			T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	S	A	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	V	N	A	L	A	I	E	A	A	K	F	I	L	I	H	P	A	Q	F	T	L	P	I	R	K	W	Q	R	N	T	V	D	F	I	T	A	L	N	R	L	D	G	V	E	V	H	P	S	G	T	.	.	.	.	T	F	F	L	L	R	L	K	K	G	T	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S																																							S	T	T							S	S	.	.	.	.	S							S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Template SS confidence
														227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.					.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	.	.	.	.	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R	H
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.									.	.	.
Template Conservation																																			.	.	.
Template Sequence		E	L	K	K	Y	X	L	E	E	Y	N	X	L	I	R	D	A	S	N	F	R	G	L	D	E	S	Y	V	R	I	T	T	Q	.	.	.	R	P	A	Q	N	Q	L	F	I	K	A	L	E	T	F	L	E	K	Y
Template Known Secondary structure										T	T								T	T	S	T	T			T	T								.	.	.
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions